Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00901 ATGCCTGAGGCTCCTAAGAACTTATGCAACATGCCAAAGGATAACCTTGATGTTGATGATGGTTGTAATACTAATGAGAGAGCACTCGAATACATTGAAGAAGTGACCAGCAACGCAGATGAAATTCAAGTAAAGGTCCTTGCTCAGATCCTTTCTCGTAGTGCCCATGTTGAGTACCTTCAACGCCATGGCCTAGATGGACGTACAGACACAAACTCTTTCAAAAAGGTCATACCCGTTGTCACTTATGAGGATTTAAAGCCAGATATTGATCGTATAGCTAATGGTGATACTTCTCCAATTTTATGTTCCAAACCCATATCAGAGTTCTTAACTAGCTCTGGAACGTCTGGTGGGGAGAGAAAATTGATGCCAACCATTGAAGAGGAGTTAGAGAGAAGGTCATTGCTTTATAGCTTGTTGATGCCAGTGATGAACCAATTTGTGCCTGGTTTGGACAAAGGCAAAGGGATGTACTTTTTGTTCATAAAATCAGAAGCCAAGACCCCAGGTGGACTCCTTGCTCGTCCAGTTTTGACAAGCTATTACAAAAGCTCACATTTCAGGAACCGAAAACCTGATCCTTACACAAACTACACTAGCCCCAATGAGACCATTCTCTGCCAAGATTCTTACCAAAGCATGTATTCTCAGTTGCTTTGTGGGCTTTGTCAAAACGAGGAAGTTCTTCGTGTTGGGGCTGTTTTCGCTTCTGGTTTTATTCGTGTCATGAAGTTCCTCGAAAAGCATTTTTTTTGTTTGTGTAATGACATCAGAATGGGTACCTTAGACACCAAAATCACTGATCCATCAGTGCGAGAGGCTGTGTTGAAAATACTCAAACCAAATCCCAAGCTTGCGGCTTTCATAGAAGCTGAGTGTAGCGAAGGGTCATGGAAGGGGATCATTACAAGGTTGTGGCCTAACACCAAGTATGTCGATGTTATTGTCACGGGAACCATGTCTCAGTACATTCCCATATTAGATTATTACAGTAACGGTCTCCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGCCTGAATTTAAACCCTTTATGTGACCCAAGTGAGGTATCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGTCCCTGAACAAGTTAAATGAACATAATGATTCAATTTCTCACTTGGAACAAGAACATTTAATAGATCTTACTGGTGTAAAGTTGGGTCAAGAGTATGAGCTTGTGGTTACCACTTATTCAGGCCTTTATAGGTACCGGGTTGGTGACATACTCCGTGTAGCTGGATTCAAGAACAAGGCTCCTCAATTCAACTTTGTGTGTCGAAAGAACGTGGTGCTGAGCATTGATTCAGATAAAACTGATGAAGTTGAACTACAAAATGCTGTGAAGAGTGCAGCTGAACATCTTGTACAATTTGGTGCATCACTCACAGAATACACAAGCTGTGCTGACACATCCACCATCCCTGGTCACTATGTCCTTTATTGGGAGATTAACATGAATAATGGGCAAACCCCAATTCCTGCTACCATTTTTGAGGATTGTTGTCTTGCAGTTGAAGAATCTCTCAACAGTGTGTATCGCCAAGGCAGGGTATCGGAGTCTATTGGACCTTTGGAAATCAAGATAGTTGAGAATGGGACATTTGACAAGCTCATGGACTTTGCTTTAAGTCAGGGTGCATCTATAAATCAGTATAAGACACCTCGTTGTGTGAAATATGCACCCATTGTGGAGCTTCTAAACTCCAAAGTTGTTTTCAATTACTTCTCTCCTGAATGCCCAAGGTGGGTTCCTGGTCACAAGAATTGGTGCACCCTTCATTGA 1836 0.421 MPEAPKNLCNMPKDNLDVDDGCNTNERALEYIEEVTSNADEIQVKVLAQILSRSAHVEYLQRHGLDGRTDTNSFKKVIPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMNQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFRNRKPDPYTNYTSPNETILCQDSYQSMYSQLLCGLCQNEEVLRVGAVFASGFIRVMKFLEKHFFCLCNDIRMGTLDTKITDPSVREAVLKILKPNPKLAAFIEAECSEGSWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLSLNKLNEHNDSISHLEQEHLIDLTGVKLGQEYELVVTTYSGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKSAAEHLVQFGASLTEYTSCADTSTIPGHYVLYWEINMNNGQTPIPATIFEDCCLAVEESLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLNSKVVFNYFSPECPRWVPGHKNWCTLH* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00901 611 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 25 597 IPR004993 -
Rops7g00901 611 Pfam GH3 auxin-responsive promoter 32 576 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00901 Rops-Chr7 12007195 12009544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00901 29 594 EF-hand Containing Proteins AT1G23160 50.087 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00901 K14487 - gmx:100818961 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00901 7 12007195 12009544 Rops7g00901 7 12007195 12009544 ECH
Rops7g00901 7 12007195 12009544 Rops3g01307 3 18817065 18820554 PCT