Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00880 ATGTTAGTCTCCTCTTCATTTTGTGCTATTTCTCTCTTTGTATCTGTGGCTTTGCTACTCTTTGGCACATCAAAGATAGCAGTAATAGACCTGGGTTCTTCACCACAAGCTGTGTCTGATTCCACCACTGTTGATCATCTTGTGTTTGGAATTGCTTCTAGCGGGAAATCATGGCCTAAGAGAAAGGAATATGTCAAGCTATGGTGGCACATGAAACCCAATAAAACAATGAGGGGATGTGTTTTTGTGGATACCCTTCCGGCTGAAGAAAACAATGCTAACAATGATGGTTCTCTTCCTCCTCTCTGTGTCTCTGAAGACACTTCTCAGTTTCTCTACACTTACAAGCCAGGTGGTTTAAGATCAGCAATCCGTGTGGCACGTGTTGTGAAAGAGACAGTGGCACTGAATCATTCTAATGTTAGATGGTATGTGTTTGGAGATGATGACACAGCTTTCTTTCCTGAGAATCTAGTGAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTTGGTGCATACTCTGAGCATTATGAGGGGACCCAGGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATTAGTTCCTCTCTAGCAAAAGTCCTAGCCAAGGTTTTTGATTCATGTATACAAAGGTATTCACATCTTTATGGAAGTGATGCCAGGGTGTACTCTTGCATAACAGAACTTGGTGTGGGATTAACATATGAACGAGGTTTTCATCAGGTTGATCTGAGGGGAAATATCTTTGGCCTATTGGCTGCACATCCATCAAGTCCCTTGTTGTCCCTACATCACCCTGATCTCATTGATCCTATCTTTCCTAACATGACAAATAAAAAATCACTGCAACATTTATTTGAAGCAGTAAATGTTGATTCCCAGAGGATCCTACAACAAACAGTTTGCTATGAAAGACGGTTTTCATGGACAATTTCAGTGTCATGGGGCTACGCTGTTCAAGTATTCCAGAACAATATGCTCTTGCCAAATGTTCTGAGAGTGCAAGAAACATTCAAGCCATGGAAGGAAAAAAATGATTTGGCAGGAATATATACTTTCAGCACAAGGAAACTTCACCCTGATCCATGTAGAAGACCCACCATTTACTATCTAGACAAGGTGTCTTCAGATAAAGATGGCATCATAAGCAGCTACAGAAAATCTTTTCAAAATTGCTCATTAGACAAGGCATCACAGAAGAAACTTGAAGTGATCAAAGTGGTCACAAATAAGTTAGACCTTGACAGCAAACAGTTGCAGACTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAGCTCTGGTCAACTAATGAAAATTGCTATCAGAGAGTGCAGATATGAAGAAATGATTTACATGAACTGA 1383 0.4064 MLVSSSFCAISLFVSVALLLFGTSKIAVIDLGSSPQAVSDSTTVDHLVFGIASSGKSWPKRKEYVKLWWHMKPNKTMRGCVFVDTLPAEENNANNDGSLPPLCVSEDTSQFLYTYKPGGLRSAIRVARVVKETVALNHSNVRWYVFGDDDTAFFPENLVKTLSKYDHRLWYYVGAYSEHYEGTQVFGFGMAFGGGGFAISSSLAKVLAKVFDSCIQRYSHLYGSDARVYSCITELGVGLTYERGFHQVDLRGNIFGLLAAHPSSPLLSLHHPDLIDPIFPNMTNKKSLQHLFEAVNVDSQRILQQTVCYERRFSWTISVSWGYAVQVFQNNMLLPNVLRVQETFKPWKEKNDLAGIYTFSTRKLHPDPCRRPTIYYLDKVSSDKDGIISSYRKSFQNCSLDKASQKKLEVIKVVTNKLDLDSKQLQTPRRHCCDVLPSSSGQLMKIAIRECRYEEMIYMN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00880 460 PANTHER FRINGE-RELATED 12 457 - -
Rops7g00880 460 FunFam Fringe-related protein-like 34 296 - -
Rops7g00880 460 Pfam Protein of unknown function, DUF604 185 433 IPR006740 -
Rops7g00880 460 Gene3D - 34 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00880 Rops-Chr7 11788974 11790607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00880 42 425 Glycosyltransferase AT1G05280 55.243 1.18e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00880 - - gmx:100779943 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01273 3 18332130 18334400 Rops7g00880 7 11788974 11790607 PCT