Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01273 ATGCTTTCCTTTCTTAACATGCAGTTATTTCACAAGCACACCAAAACTCAATCTCTTGTTAACTTCATTTTAGTCTCTTCTTCATTTTGTGTCCTTTATGTCCTTATATCAGTGCTACTCTTGGGGGACTCAAAGCTAGTACATGTTCATTCTTCATCATCATCACAAAATGTGTCCACACCCACCACTCTTGATCATCTTGTGTTTGGAATTGCTTCAAGCAAGAGTTCATGGACCAAGAGGAAGGAGTATGTGAAATTGTGGTGGAAAAACAACAATTCAATGAGGGGATGTGTGTTCTTGGATAGCATCCCAGATGAAGACCAAGCTAGAAATGATACTTCTTTTCCTCCTCTATGTGTATCTGAAGACACGTCACGGTTTCGGTACACTTGCCGGGGTGGACTGAGCTCAGCTATACGTGTGGCACGTGTTGTTGCAGAGACTGTAGCTTTGAATCATTCAGATGTGAGATGGTATGTGTTTGGTGATGATGACACGGTTTTCTTCCCAGAGAATTTGGTGAAGACTCTTTCCAAATATGATCATAAGCTTTGGTATTATATTGGGGCACACTCCGAGGTCTATGAGCAGAACCGGGTGTTTGGTTTTGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATCAGTTCCTCTCTGGCTAAAGTCTTGGCCAAGGTTTTAGATTCGTGTTTAGAGAGGTACCCTCATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTAGCAGAGCTTGGTGTAGGATTAACACATGAACCCGGGTTTCACCAGGTTGATTTGAAGGGAAATACCTTTGGCCTATTGGCTGCACATCCAGTAACTCCCTTGTTATCCCTGCATCACCCGGATCACACGGATCCGGTCTTTCCAAACATGACAACTACACAAGCTCTGAAACATTTATTTGAAGCTGTAAATGTTGATTCCCAGAGGATGCTACAACAAACAATTTGCTATGACAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGATATGCTGTTCAGGTATTCCCTAACCATATGTTTTTGCCTGAAGTTCTGAATGTGCAAGAAACATTCAAGCAGTGGAAGAAGGGAAACATGTTGGCAAAAGCATACACTTTCAACACAAGACAACATCACCCTGACCCATGTAAAAGATCCACAGTTTTCTTTCTAGACAGTGTGTCTTCCGGTAAGGATGGCATCATAAGCAGTTATAAGAGATCTTTTCAAAATTGCTCAAATGACATGGTATCTCCAAAGAAATTGGAAGTGATCAAAGTGGTCACAAAGAAGCTAGACCTTAACATCAAACAGTTGCAGGCTCCAAGAAGGCAATGTTGTGATGTATTACCCTCTAGCGCTCGTGACCAACTTGAAATTGCAGTCAGAGAATGCCAAGATGAGGAATTGATTTACATGCACTGA 1431 0.4214 MLSFLNMQLFHKHTKTQSLVNFILVSSSFCVLYVLISVLLLGDSKLVHVHSSSSSQNVSTPTTLDHLVFGIASSKSSWTKRKEYVKLWWKNNNSMRGCVFLDSIPDEDQARNDTSFPPLCVSEDTSRFRYTCRGGLSSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPENLVKTLSKYDHKLWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVLDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGLLAAHPVTPLLSLHHPDHTDPVFPNMTTTQALKHLFEAVNVDSQRMLQQTICYDRWFSWTISVSWGYAVQVFPNHMFLPEVLNVQETFKQWKKGNMLAKAYTFNTRQHHPDPCKRSTVFFLDSVSSGKDGIISSYKRSFQNCSNDMVSPKKLEVIKVVTKKLDLNIKQLQAPRRQCCDVLPSSARDQLEIAVRECQDEELIYMH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01273 476 FunFam Fringe-related protein-like 54 312 - -
Rops3g01273 476 Pfam Protein of unknown function, DUF604 198 449 IPR006740 -
Rops3g01273 476 PANTHER FRINGE-RELATED 23 473 - -
Rops3g01273 476 Gene3D - 54 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01273 Rops-Chr3 18332130 18334400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01273 19 441 Glycosyltransferase AT1G05280 54.988 3.89e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01273 - - gmx:100813816 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01273 3 18332130 18334400 Rops7g00880 7 11788974 11790607 PCT