Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00856 ATGACACAGAAATGGGTGATTTTCCTCTGTATTGGAAGCTTCTGTGCTGGGATGTTCTTCACCAATAGGATGTGGACTATACCTGAACCTAAAGGGCTTGCACGGACAACAGCTATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGGTTGTAATTCGAGAATTTTACAAGAGAAGGAAGTGAAGCGTGAAACTAAAGGCATCTATAAGGATGTTTTCAAGACACAAAATGCCAGACAAACCCTGGACAAGACTATTTCAAACTTGGAGATGGAATTGGCTGCTGCAAAGGCAGCTCAGGAGTCTATAAAAAGTGGTGCTCCTGTATCAGAAGATATCAAGATAAGTGAATCATCTCATAAGAGAAGGTACCTTATGGTCATAGGAATAAACACTGCTTTCAGCAGCAGGAAAAGAAGAGACTCAATTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAAAGACTAGAGGAAGAGAAGGGCATTATCATCCGCTTTGTAATTGGTCATGGTGCCACAGCAGGAGGTATCCTAGACAGAGCTATTGAAGCAGAAGATAACAAGCATGGGGATTTACTGAGGCTGGATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACCTACTTTGCCACTGCTGTTAACATGTGGGATGCTGACTTCTATATCAAAGTTGATGATGATGTTCACGTAAATATAGCAACACTGGGACAAACTCTAGTTAGACACCGATCAAAACCACGGGTATACATTGGATGTATGAAATCCGGGCCCGTTCTTTCTCAAAAAGGTGTAAGGTACCATGAACCAGAATACTGGAAATTCGGTGAGGCTGGAAACAAATATTTCCGTCATGCCACTGGACAGTTGTATGCCATTTCTAAAGATCTGGCTACATATATTTCAATTAACCAACGCGTTCTTCACAAGTATGCCAATGAGGATGTCTCACTAGGATCTTGGTTATTTGGACTTGATGTGGATCACATAGATGATAGGAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAGGCACAAGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACATGCAGTGGAATTTGCAGGTCTGCTGAAAGAATTAAAGAGGTCCATAGGAAATGTGGGGAAGGTGAGAAAGCTTTGTGGAGTTCCACTTTCTAG 1182 0.4213 MTQKWVIFLCIGSFCAGMFFTNRMWTIPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKEVKRETKGIYKDVFKTQNARQTLDKTISNLEMELAAAKAAQESIKSGAPVSEDIKISESSHKRRYLMVIGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHGATAGGILDRAIEAEDNKHGDLLRLDHVEGYLELSAKTKTYFATAVNMWDADFYIKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISINQRVLHKYANEDVSLGSWLFGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRKCGEGEKALWSSTF* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00856 393 Coils Coil 79 99 - -
Rops7g00856 393 Pfam Domain of unknown function (DUF4094) 3 98 IPR025298 -
Rops7g00856 393 Gene3D - 116 337 - -
Rops7g00856 393 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 83 332 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops7g00856 393 FunFam Hexosyltransferase 118 339 - -
Rops7g00856 393 Pfam Galactosyltransferase 138 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00856 Rops-Chr7 11435916 11440415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00856 1 393 Glycosyltransferase AT1G05170 79.135 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00856 K20855 - gmx:100793931 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00856 7 11435916 11440415 Rops7g00856 7 11435916 11440415 ECH
Rops7g00856 7 11435916 11440415 Rops2g04723 2 85642249 85648031 ECH
Rops7g00856 7 11435916 11440415 Rops3g01229 3 17465803 17470405 PCT