Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01229 ATGACTTGGAAAAGCAGAGGAGAGTTTTCTACTAGAAATGTTATATCTCATAGATGGGCACTTTTTCTGTGCCTTGGAAGCTTTTGTGCTGGGATGCTCTTTACTAACAGGATATGGACTGTTCCTGAAACTAAAGGACTTGCTCGACCAACAACTACAGAAGCTGATAAATTGAATGTAGTTTCAGAGGGTTGTAATTCGAGAATTTTGCAAGAGATGGAAGTGAAGCGTGATTATGGTGAAGTTTTCAAGAGTCATAATTCTATACGAACTTTGGACAAGACTATTTCAAATTTAGAGATGGAATTGGCTGCTGCAAGGGCAGCTCAGGAGTCTATACGAAGTGGTGCTCCTGTTCCAGAAGATATAAGGATGTCTGAATCATCGGGTAAGAGAAGGTACCTTATGGTTGTAGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGAGCCACTTGGATGCCAACAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTGTCATGCGCTTTGTAATTGGACATAGTGCTACATCAGGAGGTATCCTGGACAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCACGTCGAAGGATACCTTGAATTGTCAGCGAAGACAAAGACATACTTTGCCACTGCTGTGAACTTATGGGATGCTGACTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCTACACTTGGAGAAACTCTAGTTAGACACCGATCAAAACCACGGGTATACATTGGATGCATGAAATCTGGACCTGTCCTATCTCAAAAAGGAGTAAGGTACCATGAACCTGAGTATTGGAAGTTTGGTGAGTCTGGAAACAAGTACTTCCGTCATGCCACGGGGCAGTTGTATGCCATTTCAAACGATTTGGCAACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAATGAGGATGTGTCACTAGGATCTTGGTTTATTGGACTTGATGCAGAGCACATAGATGATCGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAGGCAGGCAACATTTGTGTTGCTTCATTTGATTGGACCTGCAGTGGAATTTGCAGGTCAGCTGAAAGGATTAAAGAGGTACATAGGAGGTGTGGAGAAGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1212 0.4266 MTWKSRGEFSTRNVISHRWALFLCLGSFCAGMLFTNRIWTVPETKGLARPTTTEADKLNVVSEGCNSRILQEMEVKRDYGEVFKSHNSIRTLDKTISNLEMELAAARAAQESIRSGAPVPEDIRMSESSGKRRYLMVVGINTAFSSRKRRDSVRATWMPTGEKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGESGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSAERIKEVHRRCGEGENALWSASF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01229 403 Coils Coil 89 109 - -
Rops3g01229 403 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 93 343 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops3g01229 403 FunFam Hexosyltransferase 128 349 - -
Rops3g01229 403 Pfam Domain of unknown function (DUF4094) 16 108 IPR025298 -
Rops3g01229 403 Pfam Galactosyltransferase 148 344 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops3g01229 403 Gene3D - 132 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01229 Rops-Chr3 17465803 17470405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01229 1 403 Glycosyltransferase AT1G05170 77.641 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01229 K20855 - gmx:100794838 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01229 3 17465803 17470405 Rops3g01229 3 17465803 17470405 ECH
Rops3g01229 3 17465803 17470405 Rops2g04723 2 85642249 85648031 ECH
Rops7g00856 7 11435916 11440415 Rops3g01229 3 17465803 17470405 PCT