Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00839 ATGGACAGCTTCACTTTCCCTTGGTTCCTTGCTTTCTTATGCGAATCTTGGTTCACTTTCGCTTGGATTTTTATTCTCAACACCAAATGGAATCCTGCAGTAACCAAAACTTACTTAGACCGTCTCCTGCAATGGGAACATGAGCTTCCACCAGTGGACTTGCTGGTGACAACAGCAGACCCTATACTTGAACCCCCCATCATCACAGTCAACACCGTGTTGTCTCTTTTGGCCGTTGACTATCCAGCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGGTGTTCCCCTCTTACCTTCTATGGCCTTGTTGAAGCCTCGAAATTTGCTAAGTTTTGGGTACCTTTCTGTAAGAAGTACAACGTGCAAGTCAGAGCACCCTTCAGATACTTCTCTGATGTCTCCACTGCCAAAAGTGAAGAAGACTCACCAGAATTCAAACAAGAAAGGCTACGAATGAAGGATATGTATGACAGTCTTTGCAAAAAAATTGAAGATGTTTCCCGAAATCCAATTCCATTCCAACTTGACGGAGAATTTGCAGTTTTCTCAAATACAGAGAAAAGAGATCATCCGAGCATAGTTAAGGTTATATTGGAGAACAAGGAAGGTCTTTCTGATGGGTTGCCTCACTTAATCTACGTATCCAGAGAGAAGAGGCCAGAGTATCCACATAATTACAAAGCCGGAGCTATGAATGTGTTGGCAAGAGTGTCTGGGTTGATGACCAATGCTCCCTTTATGTTGAATGTAGACTGTGACATGTTTGTGAACAATCCAAAGATTGTTCAACACGCTATGTGCATTTTGATGGATTCTAAGCGTGGAAAAGATGTTGCCTTTGTTCAATGTTTCCAGCAATTTTACGATGGAATAAAAGATGACCCTTTCGGAAATCAGTGGGTGGCGGCATTTCTGTACATAATACTGGGCATGGCAGGACTTCAAGGACCAATCTATGCAGGAACAAACACCTTCCATAGAAGAAGTGTTATTTACGGTCTTTATCCTGATGAAGTTAATAGTGGGAGAAAAGGAAAATTAGCAGATAAGATATTAATACAACAATTTGGAAGTTCAAAGGAGTTTGTCAAATCAGCAGTTCATGCTTTGGAACGGAATGCAGATTCTCCTAATGATATTAGTCCTTCTAACTTTATTAGGGCAGCAATGCAAGTTGCTGATTGTGGCTATGAAGATGGCACTAGCTGGGGTAAAAAGATGGGCTGGCTATATGGATCAGTAGCAGAGGATGTTCTCACGGGGTTGAGTATCCATAGAAAAGGTTGGAAATCAGAGTGTTGTACCCCAGATTCAATTGCCTTTACAGGCTGTGCTCCAGCAGGATTGGTCTCTACAATGATACAACAACGGAGATGGGCCGCAGGCCTCACTGTAAACTTCTTTGGCAAGTATTCTCCCGTTATGGGCACACTCTTTGGTAACATCCAACTCAGGGCAGCCTTGTCCTTTTGTTGGATTGCCACTTGGGGCTTGCGTGGTTTCTTCCATGTTTGCTATGCTTCTCTCATTGCATATTGCATCATTACCAACACCAATATCTTGCCTAAGGGACTCGGCCTATGGATTCCTTTTAGTCTTTCTGTGATCTATAATATATATACTCTAATAGAGTATCTATCAATCGGATTGTCCGTACGACATTGGTGGAATAATCAGAGAATGAGTGTAATAACAACCACTACTGCATGGTTCATTGGGTTTATGAGTGGCGTACTTAAGCTCTGTGGGATATCCGATCCAGTCTTTGAAGTAACACAGAAGGGACCCCCAACTTCTGATGCTGATGGAGATGATGATGCAGATGCTGGTAGGTTCACTTTCGATGAGTCCCCAGTTTTTGTGGCAGGCACGACCTTTTTGCTGGTGCAATTGACAGCCCTTGTTGTCAAGTTTATGGGGTTGCAACCAGCAGAAGCTCATGGTGGGAAAGGGTGTGGAGCAGGGGAGTTGATGTGTAGTATGTATCTGGTAGTATGCTACTGGCCATATTTGAAAGGGCTTTTTAGCAGAGGAAAATATGGGATCCCCTTATCCACCATATTCAAGTCAACAGTGCTTGCATTTGTTTTTGTGCAGTTCTGTAGAATTATGGGTTGA 2121 0.4286 MDSFTFPWFLAFLCESWFTFAWIFILNTKWNPAVTKTYLDRLLQWEHELPPVDLLVTTADPILEPPIITVNTVLSLLAVDYPANKLACYVSDDGCSPLTFYGLVEASKFAKFWVPFCKKYNVQVRAPFRYFSDVSTAKSEEDSPEFKQERLRMKDMYDSLCKKIEDVSRNPIPFQLDGEFAVFSNTEKRDHPSIVKVILENKEGLSDGLPHLIYVSREKRPEYPHNYKAGAMNVLARVSGLMTNAPFMLNVDCDMFVNNPKIVQHAMCILMDSKRGKDVAFVQCFQQFYDGIKDDPFGNQWVAAFLYIILGMAGLQGPIYAGTNTFHRRSVIYGLYPDEVNSGRKGKLADKILIQQFGSSKEFVKSAVHALERNADSPNDISPSNFIRAAMQVADCGYEDGTSWGKKMGWLYGSVAEDVLTGLSIHRKGWKSECCTPDSIAFTGCAPAGLVSTMIQQRRWAAGLTVNFFGKYSPVMGTLFGNIQLRAALSFCWIATWGLRGFFHVCYASLIAYCIITNTNILPKGLGLWIPFSLSVIYNIYTLIEYLSIGLSVRHWWNNQRMSVITTTTAWFIGFMSGVLKLCGISDPVFEVTQKGPPTSDADGDDDADAGRFTFDESPVFVAGTTFLLVQLTALVVKFMGLQPAEAHGGKGCGAGELMCSMYLVVCYWPYLKGLFSRGKYGIPLSTIFKSTVLAFVFVQFCRIMG* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00839 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 183 340 IPR029044 -
Rops7g00839 706 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 689 - -
Rops7g00839 706 Pfam Cellulose synthase 52 341 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops7g00839 706 Pfam Cellulose synthase 345 698 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops7g00839 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 67 494 IPR029044 -
Rops7g00839 706 FunFam Cellulose synthase-like protein H1 182 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00839 Rops-Chr7 11195412 11199237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00839 8 699 Glycosyltransferase AT2G32540 47.191 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00839 - - gmx:100795671 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00839 7 11195412 11199237 Rops7g00839 7 11195412 11199237 ECH
Rops7g00839 7 11195412 11199237 Rops3g01214 3 17190811 17205954 PCT