Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00783 ATGGTGGTGCAGAAGAGGCTAGATTATGGATTTAATGGCTACCAGGTGCCAACCAAGCCCCGAGCTACCCGATCAGCTAGGAGGAGGGCTACATTTCAAAGAAAGGTGGAGAACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTATTGCAAGAGAAACAGAATCCAACCACTTCTAGTGATAGAGCATCAGAAAAGGATCGGCATGAATTTGTTAAAGAAGAGTGCCAAGGTGCAAATAAACCATTCAAAGCTGAGCTTTCCGATGAAGCAAGTTGTGACAGAAGATGTCAACAAGGATTTGTTAAAGAAGGGTGCCCGGATGCTAATAAATCATTGAAAGCTGAGCTTTCTGATGAAGGAAGTAGTGACAGAAAATGTTTATCCAGTCTTTCTTCACAACCACACAATCAAAATTGCTACTTGAAGGAACACCCGCATCCTGAAATTGATGGCACTTCATGCATTGCTTCTATAGTAACTAGTTCTAGTTGCTCAGAAAGGTTTGTAGCTGAGATGTTGGTGGATAGAAAAAGCCATAATGAAATGGAAAAATTTGCTAGCAAAGTTGAATTAGGCTCCTCTGGATGTCCAGATAGTAGTGGTTGTAAGTTAGATGATGATGTAAGTAAAGTAAAGAATGAGCTGCATAAGGTTGAGAAGGTGCAAATTAGTACTGGGACTAGGATGTGCTGTTTTGAGGATCCCATGGATGAAAAACCTCCAGCACCTATCAGTTCAGGTGGCAATGCCAAGTTGTCTGGGTATGATGACAGCATGCCACATAGCTCATTGTCCAAAGTTTGTGACAATTTACCGGTAGTTAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTAGTAGTACAAAAACAAAGTCCTTTAGGCCAATGACTTGTATAGGTGACCAAAGAATAAGGAAAACATTGGCTTCTAAATATTGGAAAGTTGCTCAAGAACCAAAGCATGATCCACTTTCTAACAATGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAGTAGGAAGAACTATTGCAAACGCCAAAGATCCCAAATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAACTGTAGCTCCGTTTTCAATTCTAACGGATTTATCAGAAGTGGTCGCAATTATTATTCACCCAAGAATGACATGAAGCAAGGTGTTTCTTGTTCATCTTCTAGGATGTGCAAAGATCCTGGAATGTCATCCTTGGAAGCACATCAACACTCTGCATTACGATCTAGAGATTCTCATGTGAAACTTAGGATCAAATCTTTTAAGGTGCCAGAGCTTTTTATTGAGCTTCCAGAAACTGCAACCATTGGATCCTTGAAGAGGGCAGTGATGGAGGCAGTGACTGCAGTACTTGGAGGTGGATTGCGTGTTGGTATGATTCTCCATGGCAAGAAGGTTAGAGATGACAGTAAAACACTACTTCAGACTGGAATTTCTCATGATGACCAGCTGGATGCTTTAGGCTTCACCCTGGAGCCTAATTCTTCACAAAACCCACCACTCACATGTGCTAAAGATTCTCTCCATGTGCCTAGTGCCGACATGCCTCCCTCTTTAATAAGGTATCCTCCCAGTCCAGCTGTAATTCATCAAAGGATTCAGGGCTTTTCTAACATGTTACCTGAGCATCAAGTAACCAGTTTAGGTACCCTTGTTGAAAGTGATCATGATTCAGCACCTTCTCCAATCAACACATCAGTTGAAAAAAATTTGACAGATTCTAAAGAACTGATTCCTGTTCCTGAAACGGATACGGAGGCACTAGCTATGTTACCTGTGCAACAGAAGTCAAAGAGAACTGAGATCGCGCAGCGTCGAATTCGTAGGCCTTTTTCTGTTGCTGAAGTGGAAGCACTGGTTCAAGCAGTTGAAAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACTTAGTGCTTTTGATGATGCAAAGCATAGGACATATGTGGATTTAAAGGATAAATGGAAAACACTGGTCCACACGGCAAGAATATCCCCTCAACAAAGGAGGGGACAGCCTGTTCCCCAAGAACTTTTGGATAGGGTCCTCACTGCCCATGCATATTGGTCCCAGCAGCAAACTAAGCAACAGCTCAACCAGCAGCCAGAAACTTGCCTTCTCCTTTAA 2172 0.4208 MVVQKRLDYGFNGYQVPTKPRATRSARRRATFQRKVENNQMCAFDLLATVADNLLQEKQNPTTSSDRASEKDRHEFVKEECQGANKPFKAELSDEASCDRRCQQGFVKEGCPDANKSLKAELSDEGSSDRKCLSSLSSQPHNQNCYLKEHPHPEIDGTSCIASIVTSSSCSERFVAEMLVDRKSHNEMEKFASKVELGSSGCPDSSGCKLDDDVSKVKNELHKVEKVQISTGTRMCCFEDPMDEKPPAPISSGGNAKLSGYDDSMPHSSLSKVCDNLPVVSRDDDENFSGCAHPSSTKTKSFRPMTCIGDQRIRKTLASKYWKVAQEPKHDPLSNNVLDGNLKPVYSSRKNYCKRQRSQMNIPFKKRKLFNCSSVFNSNGFIRSGRNYYSPKNDMKQGVSCSSSRMCKDPGMSSLEAHQHSALRSRDSHVKLRIKSFKVPELFIELPETATIGSLKRAVMEAVTAVLGGGLRVGMILHGKKVRDDSKTLLQTGISHDDQLDALGFTLEPNSSQNPPLTCAKDSLHVPSADMPPSLIRYPPSPAVIHQRIQGFSNMLPEHQVTSLGTLVESDHDSAPSPINTSVEKNLTDSKELIPVPETDTEALAMLPVQQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLSAFDDAKHRTYVDLKDKWKTLVHTARISPQQRRGQPVPQELLDRVLTAHAYWSQQQTKQQLNQQPETCLLL* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00783 723 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 721 IPR031105 -
Rops7g00783 723 SUPERFAMILY Ubiquitin-like 425 515 IPR029071 -
Rops7g00783 723 CDD SANT_TRF 625 675 - -
Rops7g00783 723 SUPERFAMILY Homeodomain-like 625 706 IPR009057 -
Rops7g00783 723 ProSiteProfiles Ubiquitin domain profile. 430 500 IPR000626 GO:0005515
Rops7g00783 723 SMART sant 623 676 IPR001005 -
Rops7g00783 723 ProSiteProfiles Myb-like domain profile. 619 674 IPR001005 -
Rops7g00783 723 Gene3D - 612 716 - -
Rops7g00783 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 619 678 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00783 Rops-Chr7 10567371 10572557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00783 - - gmx:100780881 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00783 7 10567371 10572557 Rops7g00783 7 10567371 10572557 ECH
Rops7g00783 7 10567371 10572557 Rops11g03529 11 67483506 67488719 ECH