Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03529 ATGGTGATGAAGAAGAGGGTAGATTATGGATTCAATGGCTTTCGAGTTCCTGTTATTCCTAAAGCTCCTAGATCTGCTAGAAGGAGGGGTCCATTCAATAATTCAGCTCAGGATGATCAAGCTTGTGCTTTTGAACTATTAGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGGAAATCATCAACCTGCCTTTAGCCAAGGCGTTGTCATTGAGCAAGATAGAAAAGATGAAGTTAAACCATTGATAACTGAGGGAATTCAACAGGGAAGTTGTGCAGAAAGTGTTTTTATGACTGAGGTAGCCTCACAAAACAGTAGTAAGAAACCTCTTTTGCATGCCAAGACTGATTGTTCACTAGGACACATATCAGTTAATAATAATTCTGACTGTTCACAAAAAGTTGAAGCTGATGTGAAGACTGAAACCTTTGAATGGGATAATAAATTTAGGCATTATTCTAATAGATTAGTAGAAGCACCTGAAAATTTTAGGGATTCTTGTGAGAGTAAAATAAAGAATGGATTTAGACGGGAACAGGAGGCTGGCAGTTTAGGCTTTCAAGGATCAACTTTGGCTGACAAATGTGATTTGAAGGACCACTTAGAATTGTATGTGCCTCCTGCACTAATTGACTCAAAAATTAATGTTAAATATCCACCTCATAGGAAATCTTTTCCCAGTGCTTCCTTTTCCAAGCATGGGAATGGTATTAAGTTAGGTTTTAGAGATGATGACGAAAAATTTTTAAGGTGCAAAAAAGTTTGCACTAAGTCGAAGGCTTTTAGGTCTCCACGACGCATTGCACACCGAAGAATCAAGAATCTGCTGTCTTCCAAATACTGGAAGGTTGCTCCAAAGTTGAAGGAGTGTGAACTTTCTAGATCTGAATTTGCAGATCTAGGAGTACCTCTTTATCGTAAGAGGAAGACTTGTTATGGTATTGAAAGATCTCAGCTCAGCACTATTGTCAAGAGGAGGAAATTCTTTGACCATGTATCAGGGGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCTAATTCACCTGAGAAAGGAAAAGATGTAGACAACCCTAGCTCATCTGCAAAATTGCACTTACCTAAGGATTCTCATGTGAAGTTTAGCATTGAGTCATTCAGGATACCAGAGCTTTATGTTGAGGTTCCCGAAACTGCAACTGTTGGTTCACTAAAGAGGACAGTCATGGAGGCAGTGCTGGCTATACTTGGAAGTGATATGCATGTTGGTGTTCTTCTCCAGGGGAACAAGGTTAGAGATGACAATAGAACACTTGTGCAGACTGGTATATCTTGCAAAGAAAATCTTGATACCCTTAGTTTCATGTTGGAGCCCAATTCTCTACTAGCTTCTCCAGATCTTTGTGTTGGTGACCCTTCTTCTCAATGTGAAACATCCCAACCTACCGGGTCCCCAGAAACTCCTGTCTTAGATTCAGGGCTTACTGATACCTTGCATGACCCCAACTTGCTGACAAACCAAGGCAACCTAATTGAAAGTAACCATGAATCTACTTCTCCCCCCACTGACAGTATAGTTGACAAAATGACACCAGATTCCAGAGCACTAGTTGCTGTTCCAGCTAACACAGAAGCATTAGCTGTGGTTCCTGTGAGTCAGAAAACCAAGCGCTCCGAGCATGTACAGCGTCGAATCAGGAGACCATTCTCTGTGTCTGAGGTAGAAGCACTTGTTCATGCTGTTGAAGAACTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTAGTGCACACTGCAAGCATCTCCCCTCAACAAAGGAGAGGACAGCCAGTACCTCAGGAGCTATTGGACAGAGTTTTGGCTGCACATGCTTACTGGTCTCAGCACCAAGCCAAGCAACAAGGCAAGCATCAAGCTGGACCTGAAACCTTGATAATCATAGAGGCCTCAGCTGAAAGACCTGATCTGTGTTGA 2049 0.4192 MVMKKRVDYGFNGFRVPVIPKAPRSARRRGPFNNSAQDDQACAFELLASLAGKLLQESESSASSNASEGNHQPAFSQGVVIEQDRKDEVKPLITEGIQQGSCAESVFMTEVASQNSSKKPLLHAKTDCSLGHISVNNNSDCSQKVEADVKTETFEWDNKFRHYSNRLVEAPENFRDSCESKIKNGFRREQEAGSLGFQGSTLADKCDLKDHLELYVPPALIDSKINVKYPPHRKSFPSASFSKHGNGIKLGFRDDDEKFLRCKKVCTKSKAFRSPRRIAHRRIKNLLSSKYWKVAPKLKECELSRSEFADLGVPLYRKRKTCYGIERSQLSTIVKRRKFFDHVSGVTSDGGFSSESVSNSPEKGKDVDNPSSSAKLHLPKDSHVKFSIESFRIPELYVEVPETATVGSLKRTVMEAVLAILGSDMHVGVLLQGNKVRDDNRTLVQTGISCKENLDTLSFMLEPNSLLASPDLCVGDPSSQCETSQPTGSPETPVLDSGLTDTLHDPNLLTNQGNLIESNHESTSPPTDSIVDKMTPDSRALVAVPANTEALAVVPVSQKTKRSEHVQRRIRRPFSVSEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTASISPQQRRGQPVPQELLDRVLAAHAYWSQHQAKQQGKHQAGPETLIIIEASAERPDLC* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03529 682 Gene3D - 559 663 - -
Rops11g03529 682 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 663 IPR031105 -
Rops11g03529 682 ProSiteProfiles Myb-like domain profile. 566 621 IPR001005 -
Rops11g03529 682 CDD SANT_TRF 572 622 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 58 79 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 58 77 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 347 367 - -
Rops11g03529 682 SMART sant 570 623 IPR001005 -
Rops11g03529 682 SUPERFAMILY Homeodomain-like 572 653 IPR009057 -
Rops11g03529 682 FunFam Telomere repeat-binding protein 1 560 663 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 503 528 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 347 376 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 476 528 - -
Rops11g03529 682 MobiDBLite consensus disorder prediction 476 496 - -
Rops11g03529 682 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 625 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03529 Rops-Chr11 67483506 67488719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03529 - - gmx:100814318 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00783 7 10567371 10572557 Rops11g03529 11 67483506 67488719 ECH
Rops11g03529 11 67483506 67488719 Rops11g03529 11 67483506 67488719 ECH