Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00686 ATGCGAATCTTCATTGTGCTTTCTCTCACAACCCTTCTTCTCTTCTCTTCCTTCTCTCGTGTTCTCTCCGAAGACGAAGATCTCAGCTTCCTCGACGAACCCGAAGATGACGTCACCTCCGCCTCTCACCACGACGACGACGACGGCTTCGACGATGACTTCGCCGATCTCGAAGACTTTTCCGGCTTCGAGGACACGGATGCTTACAAAGAACCCGAGGTGGACGACAAAGACGTCGTCGTTTTGAAGGAGAAGAATTTCACTGACGTGGTGAAGAACAACCGGTTCGTGATGGTTGAATTCTACGCTCCATGGTGCGGTCACTGTCAGGCCTTGGCGCCTGAGTATGCCGCCGCCGCCACGGAGTTGAAGGGTGAAGATGTAATTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAGTTGGCACAGGAGTATGATATTCAGGGTTTCCCTACTATCTACTTCTTCGTTGACGGTCTTCACAAACCTTATAATGGACACAGGAACAAGGAAGCTATAGTGACGTGGATTAAGAAGAACATAGGACCTGGTATACATAACATAACTACATTGGATGATGCTGAACGCATATTGACTTCCGAAACTAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTTGGTCCTGAGAGTGAGGAGCTTGCTGCAGCTTCAAGACTTGAGGGTGATGTCAATTTTTATCAAACTGTGAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCCAATGTCAAACGCCCAGCTTTGATCCTGGTTAAGAAAGACGAGGAAAAACTGAACCATTTTGATGGCCAATTTGTCAAGTCTGAAATAGCAGAATTTGTCTTCTCCAACAAGCTACCTTTGGTAACAATTTTTACCAGAGAAAGTGCCCCATCAGTCTTTGAAAATCCAGTCAAGAAACAGGTGTTGCTGTTTGCAACTTCAAATGATTCAGAGAAATTCGTCCCAGTATTTCAAGAAGCAGCAAAATTTTTCAAGGGGAAGTTGATCTTTGTGTATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCGGATCACTTTGGTATCAGTGGGAGTGCTCCAAAAGTACTCGCATACACTGGAAATGATGATGGAAAAAAATTTATACTTGATGGAGAGGTGACTATTGACAAAATTAAGGCATTTGGGGAAGATTTCCTCGAAGACAAGCTAAAACCTTTTTTCAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGGAATAATTTTGATGAAATTGTATTGGATGAGTCAAAGGATGTCCTCCTCGAGATTTATGCGCCCTGGTGTGGCCATTGCCAAGCACTGGAACCAACATACAACAAGCTTGCAAAACATCTCCGTGGTATTGAGTCTCTAGTGATAGCCAAGATGGATGGAACAACAAATGAGCATCCCAGGGCAAAGTCTGATGGATACCCTACGCTTCTCTTCTTCCCAGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACTGATCGTACAGTGGTAGCCTTTTATAAGTTCCTCAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAACTTCTACACCGGAGATCCCTGATGCTAAGGCGACCTCTGATGCCAAAGAGAGCCAGAGTAGCACTAGCGATGTGAAGGATGAATTATGA 1692 0.4433 MRIFIVLSLTTLLLFSSFSRVLSEDEDLSFLDEPEDDVTSASHHDDDDGFDDDFADLEDFSGFEDTDAYKEPEVDDKDVVVLKEKNFTDVVKNNRFVMVEFYAPWCGHCQALAPEYAAAATELKGEDVILAKVDATEENELAQEYDIQGFPTIYFFVDGLHKPYNGHRNKEAIVTWIKKNIGPGIHNITTLDDAERILTSETKVVLGFLNSLVGPESEELAAASRLEGDVNFYQTVNPDVAKLFHIDPNVKRPALILVKKDEEKLNHFDGQFVKSEIAEFVFSNKLPLVTIFTRESAPSVFENPVKKQVLLFATSNDSEKFVPVFQEAAKFFKGKLIFVYVEMDNEDVGKPVSDHFGISGSAPKVLAYTGNDDGKKFILDGEVTIDKIKAFGEDFLEDKLKPFFKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKSDGYPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSTSTPEIPDAKATSDAKESQSSTSDVKDEL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00686 563 CDD PDI_a_PDI_a'_C 417 519 - -
Rops7g00686 563 Pfam Thioredoxin-like domain 220 391 - -
Rops7g00686 563 SUPERFAMILY Thioredoxin-like 284 414 IPR036249 -
Rops7g00686 563 Pfam Thioredoxin 417 502 IPR013766 -
Rops7g00686 563 Pfam Thioredoxin 79 179 IPR013766 -
Rops7g00686 563 PRINTS Thioredoxin family signature 146 157 - -
Rops7g00686 563 PRINTS Thioredoxin family signature 97 105 - -
Rops7g00686 563 PRINTS Thioredoxin family signature 105 114 - -
Rops7g00686 563 ProSitePatterns Thioredoxin family active site. 98 116 IPR017937 -
Rops7g00686 563 Gene3D Glutaredoxin 286 410 - -
Rops7g00686 563 ProSitePatterns Thioredoxin family active site. 437 455 IPR017937 -
Rops7g00686 563 NCBIfam protein disulfide-isomerase domain 82 180 IPR005788 GO:0003756
Rops7g00686 563 ProSiteProfiles Thioredoxin domain profile. 395 524 IPR013766 -
Rops7g00686 563 NCBIfam protein disulfide-isomerase 77 563 IPR005792 GO:0003756
Rops7g00686 563 SUPERFAMILY Thioredoxin-like 72 182 IPR036249 -
Rops7g00686 563 FunFam Protein disulfide-isomerase 412 525 - -
Rops7g00686 563 PANTHER PROTEIN DISULFIDE ISOMERASE 13 560 - -
Rops7g00686 563 Gene3D Glutaredoxin 411 525 - -
Rops7g00686 563 FunFam Protein disulfide-isomerase 68 180 - -
Rops7g00686 563 CDD PDI_b'_family 306 396 - -
Rops7g00686 563 SUPERFAMILY Thioredoxin-like 412 524 IPR036249 -
Rops7g00686 563 CDD PDI_b_family 185 284 - -
Rops7g00686 563 MobiDBLite consensus disorder prediction 530 563 - -
Rops7g00686 563 Gene3D Glutaredoxin 182 285 - -
Rops7g00686 563 MobiDBLite consensus disorder prediction 530 553 - -
Rops7g00686 563 FunFam Protein disulfide-isomerase 286 411 - -
Rops7g00686 563 CDD PDI_a_family 80 177 - -
Rops7g00686 563 FunFam protein disulfide-isomerase A2 181 285 - -
Rops7g00686 563 SUPERFAMILY Thioredoxin-like 187 296 IPR036249 -
Rops7g00686 563 Gene3D Glutaredoxin 67 181 - -
Rops7g00686 563 ProSiteProfiles Thioredoxin domain profile. 57 182 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00686 Rops-Chr7 9047552 9052035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00686 K09580 - gmx:100804924 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00686 7 9047552 9052035 Rops7g00686 7 9047552 9052035 ECH
Rops7g00686 7 9047552 9052035 Rops3g00947 3 12040664 12045702 PCT