Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00680 ATGAGTGAGACGAGTTCACCAGAGACGCGGCTGCACGCTATCTCTTCCACCTCCGATCATGGGCCTGAGCCTCCGATCCAACTCCACTTGCCTCCCCTCTCATCGAGCCTCTTCGACGCAGAGCCATCTTCGCATCAAGAACCAAACGGCGTCGTTCACGGATCTGGTGCACGACCCTCCTCTCAACCTGCAAGTCCTAGTAGCAGCGGTTACGCTGCAGAAAGAGGTAGCAGCACTGCCACAAGCGTGTCACAGATTGAGGAGGAGGTTGTTCACCACGAAATTGAGGAGATGACCATCCACGATTCCCCATCCGTCGCTAATGATTCCCACTCCTCCCGGAAACAACATCTAGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGATGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAGAATGGGGGTGACCGTGTCAAATTGGTGAGAGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAGCCTTATGAGTCATTAAGGGGTCAGTTGGATCTTATTTATGGCCAGATGATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAAAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACATTGTCTTCTCTTCACTAATCCACTCTTTTAGTCGGAATCCGGCTACATTTCTTCATGCCTATACTTGTATGCCTCTTGCATATGCAACAAGGCAAGCTGCAGGTGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTCTGTTTGCGATACTGATGTGCAGACAAAAGGTAATCAGTCTAGTGGGTGCTCAGAAAGCCACTCTTCATCCAGATGATATGTTGCTGCTTGCCAACTTTGTGATGTCATCAGAATCCTTTAGGACATCGGAAGCATTTTCTCCTGTTTGCTTGCCAAGATACAATCCTTTGGCATTTTTGTATGCTTATATCCATTATTTTGATGCTGACACATACTTGATTTTGCTGACCACTAGTTCTGATGCATTTTACCATCTTAAGGACTGCAGGATTCGTATCGAAACGGTGCTTTTGAAGTCAAATATCCTTAGTGAAGTTCAGAGATCTTTGTTAGATGGTGGAATGCATGTTGAGGATCTGCCATCCTTACCTCATTCTGGATCATCCCCTCATTTAGGACAGCATAGGCTTCGATCAGACTCTCCTGAAAGAATGAGGGAACCTAATTCTGGTGTTGGCGGTGCTGCTGGGTTGTGGCATTTCATATATCGCAGCATATATCTTGATCAATATGTATCTTCAGAGTTTTCATCACCTATCAACACTCCTCGGCAGCAGAAAAGACTGTATAGAGCATACCAGAAACTTTTTGCATCCATGCATGATAAAAGAGTTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTACGTTCTGCTTTGTTGGGTAACACAGGATTTTGAGCTTTACGCGGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGCGTCTGTCAATGGGTAAAAGATGTGGAAAGTGAAATATTTTTACTAGGAGCTAGCCCCTTTTCATGGTGA 1695 0.4442 MSETSSPETRLHAISSTSDHGPEPPIQLHLPPLSSSLFDAEPSSHQEPNGVVHGSGARPSSQPASPSSSGYAAERGSSTATSVSQIEEEVVHHEIEEMTIHDSPSVANDSHSSRKQHLDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLDLIYGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSRNPATFLHAYTCMPLAYATRQAAGAILQDVADSGVLFAILMCRQKVISLVGAQKATLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNPLAFLYAYIHYFDADTYLILLTTSSDAFYHLKDCRIRIETVLLKSNILSEVQRSLLDGGMHVEDLPSLPHSGSSPHLGQHRLRSDSPERMREPNSGVGGAAGLWHFIYRSIYLDQYVSSEFSSPINTPRQQKRLYRAYQKLFASMHDKRVGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVESEIFLLGASPFSW* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00680 564 MobiDBLite consensus disorder prediction 415 441 - -
Rops7g00680 564 MobiDBLite consensus disorder prediction 55 86 - -
Rops7g00680 564 Pfam Third Longin domain of FUZ, MON1 and HPS1 450 550 IPR043970 GO:0016192
Rops7g00680 564 MobiDBLite consensus disorder prediction 98 121 - -
Rops7g00680 564 PANTHER SAND PROTEIN-RELATED 56 562 IPR004353 GO:0006623
Rops7g00680 564 Pfam First Longin domain of FUZ, MON1 and HPS1 132 252 IPR043972 GO:0016192
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 529 542 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 542 562 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 264 285 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 312 328 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 365 391 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 150 170 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 337 360 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 288 301 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 513 527 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 235 247 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 132 149 IPR004353 GO:0006623
Rops7g00680 564 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 184 198 IPR004353 GO:0006623
Rops7g00680 564 MobiDBLite consensus disorder prediction 1 86 - -
Rops7g00680 564 MobiDBLite consensus disorder prediction 1 22 - -
Rops7g00680 564 Pfam Second Longin domain of FUZ, MON1 and HPS1 293 384 IPR043971 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00680 Rops-Chr7 9000169 9005747 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00680 K20195 - gmx:100814534 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00680 7 9000169 9005747 Rops7g00680 7 9000169 9005747 ECH
Rops7g00680 7 9000169 9005747 Rops3g00951 3 12096369 12101391 PCT