LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g00951	ATGGCTTCTTCCGAATCGCACTCCGAACCTACGTCGCCGCCTCAACACCACTTAGCTTCGGACGAGGGAGAGGTCAGGGCTTATATCGAACCCGGTTCGGGTGGTGCCGTTTGGGGCCGAACCGGTTCAGAGCTCGAAGTGGATGTTCCCTCGAGCCCTAGCAGTAGCGGTTATGCCGGTGAAAGAGGAAGCAGCAGTGCCACCAGCGGTTCCTTAATTGAGATTGAGCACGAAGAAGAAATAGAAGGAGAGGAGCACATGATGAGCAGGAGCATTCAACAAATTGATGAAATCTCTATCTCCGATTCCAACAACTCTTGGGTTCCAGGGAAACGACATCTCGATGAGGATGATGCTTCCATTTCTTGGAGGAAAAGGAAGAAACATTTCATTGTTCTCAGTCATTCTGGCAAACCTATATATTCTAGATATGGAGATGAATACAAACTTGCCGGCTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGTGACTCTGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGATTTTTCTTGTGAAAGGACCAATTTACTTGGTCTGCATCAGCTCCACCGAAGAACCTTACGAGTCATTACGGGGCCAGTTGGAGCTAATTTATGGTCAGATGCTTGTCATACTAACAAGATCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACATTGTCTTCTCTTCTCTAATCCACTCTTTCAGTTGGAACCCAGCTACATTTCTTCATTCATATACTTGTCTTCCTCTTGCATATGCAACAAGGCAAGCTGCAGGTGCTATCTTGCAAGACATTGCTGATTCAGGTGTTTTGTTTGCAATATTGATGTGCAGACACAAGGTAATCAGTCTTGTTGGTGCTCAGAAAGCTTCCCTTCATCCAGATGATATGATGCTGCTGTCCAACTTCGTTATGTCATCAGAATCCTTCAGGATGTCGGAATCATTTTCTCCAGTGTGCTTGCCAAGATATAATCCTTCAGCATTTTTGTATGCTTATATCCATTATTTTGATGCTGACACGTACTTGATGTTGCTAACCACTAGTTCAGATGCATTTTATCATCTTAAGGATTGCAGGATTCGTATTGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGGGGGATGCATGTTGAGGATCTGCCACCAATACCTCATTCTGGATCATCACCTCATCTGGGCCAGCACATGCTTCCCACGGATTCTCCTGAAAGATTCAAGGAACCTGATACTGACATTGGAGGTCCTGCTGGTTTGTGGCATTTCATATACCGCAGCATATATCTGGATCAATATGTCTCTTCAGAATTCTCATCATCGATTAGTACTCGTCAACAGAAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAAGGGAATTGGACCACACAAAACACAATTTAGAAGAGATGAAAACTATGTTCTTCTATGTTGGGTGACACAGGATTTTGAGTTTTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCGATAAAGACTTGCAACCGTGTTTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTCTGCTAGGAGCTAGCCCCTTTTCATGGTGA	1683	0.4367	MASSESHSEPTSPPQHHLASDEGEVRAYIEPGSGGAVWGRTGSELEVDVPSSPSSSGYAGERGSSSATSGSLIEIEHEEEIEGEEHMMSRSIQQIDEISISDSNNSWVPGKRHLDEDDASISWRKRKKHFIVLSHSGKPIYSRYGDEYKLAGFSATLQAIISFVENGGDSVKLVRAGKHQVIFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTRSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHSYTCLPLAYATRQAAGAILQDIADSGVLFAILMCRHKVISLVGAQKASLHPDDMMLLSNFVMSSESFRMSESFSPVCLPRYNPSAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIRIEMVLLKSNVLSEVQRSLLDGGMHVEDLPPIPHSGSSPHLGQHMLPTDSPERFKEPDTDIGGPAGLWHFIYRSIYLDQYVSSEFSSSISTRQQKKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFEFYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW*	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g00951	560	MobiDBLite	consensus disorder prediction	1	15	-	-
	Rops3g00951	560	MobiDBLite	consensus disorder prediction	47	72	-	-
	Rops3g00951	560	Pfam	Second Longin domain of FUZ, MON1 and HPS1	289	380	IPR043971	GO:0016192
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	128	145	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	260	281	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	333	356	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	538	558	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	308	324	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	146	166	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	180	194	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	525	538	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	231	243	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	361	387	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	509	523	IPR004353	GO:0006623
	Rops3g00951	560	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	284	297	IPR004353	GO:0006623
	Rops3g00951	560	PANTHER	SAND PROTEIN-RELATED	27	558	IPR004353	GO:0006623
	Rops3g00951	560	MobiDBLite	consensus disorder prediction	1	73	-	-
	Rops3g00951	560	Pfam	First Longin domain of FUZ, MON1 and HPS1	128	248	IPR043972	GO:0016192
	Rops3g00951	560	Pfam	Third Longin domain of FUZ, MON1 and HPS1	446	546	IPR043970	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops3g00951	Rops-Chr3	12096369	12101391	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g00951	K20195		-	zju:107411372	892.493

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops7g00680	7	9000169	9005747	Rops3g00951	3	12096369	12101391	PCT