Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00676 ATGTTTTGGAAGCTCGCTTCTCTTTCTGCTTCCTCCCCCGTGGAGGCAATAATAGACAAGGAGAATTTCACTTTAGAAGAGCTTTTGGATGAAGAGGAAGTAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTTATCAACTTTCTGAGAGATCCAGCTCAGGTTGAGCAATTGTTACGCTACATTATTGAAGAGCCACCAGAAGATGCTGAAAGTAAACGGGCCTTCAAGTTTCCATTCATTGCCTGCGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACATTGGTGGATGAAGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCCAATCGTTCGCATAGTACCTTGCTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTGCCACTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGTCAGCTAGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGAGCTGATGACCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTGTTGATAAATTAAGTTCATCTAGTTCTCCTGAAGTTCATGCCAATGCAGCTGAAACATTATGTACAATAACTAGAAATGCCTCATCTACGCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCTAAAATTTTGGATCATGCATTGGAGGATTCACAATCAAAGTCCAGCCTTGTGAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCTGCCATATCATCTCCCCTTTTTCATTCATTCCGAACTCAACACATGTATGAGCCATCAATTCCTGTGAACCCAGAGACTATTAGTGCAATGCTCCCTAAACTTAGTGAATTGCTAATGCTTTTGAATGTATCATCCGATGAAAAAGTATTGCCTACAACATATGGAGAAGTGAGACCTCCACTTGGGAAGCATAGATTAAAGATTGTTGAGTTCATTGCAGTCCTTCTAAAGACTGGAAATGAAGCGGCAGAAAAAGAAATGGTCAACTCAGGAACCATTCAACGAGTTATTGATCTTTTCTTTGAGTATCCATATAATAACTCATTACACCATCATGTAGAGAGTATCATATTGTCATGTTTGGAGAGTAAAACTGATGCCATTGTTGATCATCTTCTTCGAGATTGTGATTTAATTGGAAGAGTTCTCCAAGCAGATAAACATCCTATTCTCTCTGCTGACAGAAATTTGCCAACAGTACCTGCTGCTGGAAAACAGGCACCACGGGCAGGAAATATAGGGCATATTACTCGAATTGTTAACAAACTTGTTCACTTGGCACACAATCGAAGCCACATACTGACATGTCTTCAGGAAAATAGTGAGTGGAATGAATGGCAAGCTACAGTTCTTATGGAGCGTAATATTGTTGAAAATGTTCACCGTTGGGCTTGTGGACGTCCAACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGACCTTCATGACAGGGACTATGATGTTGCAGCTTTAGCTAATAATTTGAGCCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAATGAAGAGGAACGTGGAAGCCTTGATCGAGATGACGAGGATGTCTACTTTGATGATGACTCTGCTCAAGTTGTCATATCGTCCCTAAGACTCAGTGATGATCAAGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCTACTGGTAACACAACATCATCGGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATGGTGGTAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTGAATGAAAGCAAAAATAATCTGAATGGTACATCTAGCTCAAACACAAACTTCTTCAGTGGAGTAACAAGTAACAATGGAGGTACTTTGAACTTTGAAAATGGAAAGCCGAGCGCTTCACATGATATGGGATTCTTCCGGTTCGAGGCATCGGACAATGATGAGTTGTTTAGTGATCGGCCTTTGCCTGATTGGGTGGGATGGAGTGAACCTTCAGATATGCAAGTTGCAGGCTCAAGCACTAATAATCCCTTTGTGGATCATGACGAGCCTGGTAGCAACCTTTCTCCTAAACCTCAATTAGGTAGCCCTAAATCTAGTTCTCCTTCAAATGGGGATTCTGCTCCTTCAAATGGGTCGCCAACTTCTCCAAATTCGACTGGGGGGAGTATTGACTTGAGTCAAAAATCAGTAGCAGTACCCTCGCTATTTGAGGAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCAATGGAACAGGCCCTGAAAGAAGGGATAGTTGGGGAAGCAGGCCCATTGAAAAGAAACATGGTCCCTAAAGTGGCAGAAAAGGAAAGTTCCGAAGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCCAATTACTGGAGGGTTGACCAAGAAGTTGCTGTTCTTGAGTGA 2553 0.4105 MFWKLASLSASSPVEAIIDKENFTLEELLDEEEVIQECKALNSRLINFLRDPAQVEQLLRYIIEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPNRSHSTLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSSSSSPEVHANAAETLCTITRNASSTLAIKLSSPSFVAKILDHALEDSQSKSSLVNSLSVCISLLDPKRSAISSPLFHSFRTQHMYEPSIPVNPETISAMLPKLSELLMLLNVSSDEKVLPTTYGEVRPPLGKHRLKIVEFIAVLLKTGNEAAEKEMVNSGTIQRVIDLFFEYPYNNSLHHHVESIILSCLESKTDAIVDHLLRDCDLIGRVLQADKHPILSADRNLPTVPAAGKQAPRAGNIGHITRIVNKLVHLAHNRSHILTCLQENSEWNEWQATVLMERNIVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGSLDRDDEDVYFDDDSAQVVISSLRLSDDQGSSLFTNSNWFAFQDDRIGDATGNTTSSEMMDEINLNGAANGGNSSDDEVVVGEDEELNESKNNLNGTSSSNTNFFSGVTSNNGGTLNFENGKPSASHDMGFFRFEASDNDELFSDRPLPDWVGWSEPSDMQVAGSSTNNPFVDHDEPGSNLSPKPQLGSPKSSSPSNGDSAPSNGSPTSPNSTGGSIDLSQKSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVPKVAEKESSEEGGPGIKEFNDANYWRVDQEVAVLE* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00676 850 MobiDBLite consensus disorder prediction 630 655 - -
Rops7g00676 850 SUPERFAMILY ARM repeat 179 460 IPR016024 -
Rops7g00676 850 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 814 IPR007587 GO:0019903|GO:0043666
Rops7g00676 850 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Rops7g00676 850 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Rops7g00676 850 Gene3D - 139 424 IPR011989 -
Rops7g00676 850 MobiDBLite consensus disorder prediction 729 767 - -
Rops7g00676 850 MobiDBLite consensus disorder prediction 638 655 - -
Rops7g00676 850 MobiDBLite consensus disorder prediction 701 767 - -
Rops7g00676 850 MobiDBLite consensus disorder prediction 706 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00676 Rops-Chr7 8942455 8952379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00676 K15501 - gmx:100777597 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00676 7 8942455 8952379 Rops7g00676 7 8942455 8952379 ECH
Rops7g00676 7 8942455 8952379 Rops3g00956 3 12172089 12182276 PCT