Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00956 ATGTTCTGGAAGCTTCCATCTATATCTTCCTCCTCTCCTGTGGAGGCAATATTGGACAAGGAGAACTTCACTTTGGAAGAGCTTCTGGACGAAGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATCAACTTTCTGAGAGATAAAGCGCAGGTTGAGCAATTGCTACGGTACATTATCGAAGAACCACCAGAAGATGCTGAAAACAAACGGGTCTTCAAGTTTCCATTCATTGCCTGTGAGATATTCACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTCTCCTTCTTGGAACCTGATCGTTCTCATAGTTACTTGCTGGCTGGTTACTTTAGCAAGGTTGTTGTTTGTCTAATGATTCGAAAGACAGCACCACTTATCAATTATGTTCAAGCCCATCAGCATGTTTTTCGCCAACTGGTTGATTTGATAGGCATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCCGATGACCATGCATATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACTTGCTAGAGATGATTGTCGATAAATTAAGTCCATCTAGTCCTCCTGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAGTCTCTCGAATTCCATCATCTACCCTAGCAATTAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTTATGCATTGGAAGATTCGCAATCAAAGTCTAGCCTTGTCAACTCACTTTCGGTGTGTATTTCTTTGTTGGATCCCAAAAAATCAGCAGTTTCATCTCCACTTTTTCATTCATTCCGAAGTCAAAACATGTATGAGCCTCCAATTCCTGTAAACCCAGACACTATTAGTGCAATGCTCCCTAAACTTGGTGAATTGCTTGTGCTTTTGGATGTGTCATCTGATGACAAGGTATTGCCTACAACATATGGCGAATTGAGACCTCCACTCGGAAAGCATCGATTAAAGATTGTGGAGTTCATTGCAGTACTTTTAAAAACTGGAAATGAAGTAGCAGAAAAAGAATTGGTCAACTCAGGAACCATTCGACGCGTCATCGACCTTTTCTTTGAGTATCCATACAATAACTCATTACATCATCATGTAGAAAGTATCATATTATCGTGTTTGGAGAGCAAAACTGACGCCATTGTTGATCATCTTCTTCGAGATTGTGATTTAATTGGAAGGTTTCTCCTAGCAGATAAACATTGTATTCTTTCTGCTGAAAGCAATCAGCCAACTGTACCTGCTGCTGGAAAACGGGGGACACGGGTAGGAAACATTGGACATATTACTCGGATTGTTAATAAACTTGTTCACTTGGCTCACAACCAAAGCCACATTAGGGCATGCCTTCAGGAAAACGGTGAGTGGAATGAGTGGCAAGCTACAGTTCTTCAGGAACGTAATATGGTTGAGAATGTTCACCATTGGGCTTGTGGACGTCCAAGTGCTTTGCAAGATAGGATGAGGGATAGTGATGATGATGATCTTCATGACAGAGACTATGATGTTGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGGAATGACGATAATGAAGAGGAACGTGGCAGTCTGGATCGAGATGATGAGGATGTCTACTTTGACGATGATTCTGCTGAAGTAGTCATATCGTCCCTAAGACTTGGTGATGATCAAGGGAGTAATCTGTTTACAAACTCCAACTGGTTTGCGTTCCAAGACGACAGAATTGGTGATGCACCTGGTGGCACATCATCCTCTGAGATGATGGATGAGATAAACTTGAATGGAGCTGTAAATGGTGGTAGCAACAGTAGTGACGACGAGGTAGTGGTTGGAGAGGATGACGAATTGGCTGACAGCAAAAATACTGTGAATGGTACATCTAGCTCAAGCTCGAACTTCTTTAGTGGATTAACTGGTGGTGATTCCATGAATGGAAACTCTTTAGACTTTGAAAGTGAGAAGGCAAGCGCTTCACATGATATGGGATTCTTCAGGTTCGAGGCACCGGACAATGAGGACTTGTTTGGGGATAGGCCTTTACCAGATTGGGTGGGATGGGGTGAACCATCAGATTTGCAAGTTGCTGGATCAAGTATGAATCCCTTTTTGGATCATGATGAGTCTGGTAGTAATTTGCCTAGTAAGCCTCAACTAGGCAGCCCCAATCCGAGTTCTCCTTCAAATGGGGAATCGGTACCTTCAAATGGGTTGCCGACTACTGGAGATTCAGTGGAGGGGGGTGGTGACTCAAATCAAAGAGCGGGAGCAGTACCCTCGCTATTTGAAGAGGATGTGGAATTTGTAGGTGTAGAATTAGAAGGTACCGAGAAGGCAACGGAACAGGCTCTCCAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAACACACGGAGTCCCGAAAGTGTCAGAAAAGGAAAATTCTGAAGAGGGCAGTCCGGGTGTGAAGGAGTTCAATGATGCAAATTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTAGAGTGA 2559 0.4259 MFWKLPSISSSSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDKAQVEQLLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPDRSHSYLLAGYFSKVVVCLMIRKTAPLINYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHAYPNFIDVMQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTVSRIPSSTLAIKLSSPSFVAKILGYALEDSQSKSSLVNSLSVCISLLDPKKSAVSSPLFHSFRSQNMYEPPIPVNPDTISAMLPKLGELLVLLDVSSDDKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKELVNSGTIRRVIDLFFEYPYNNSLHHHVESIILSCLESKTDAIVDHLLRDCDLIGRFLLADKHCILSAESNQPTVPAAGKRGTRVGNIGHITRIVNKLVHLAHNQSHIRACLQENGEWNEWQATVLQERNMVENVHHWACGRPSALQDRMRDSDDDDLHDRDYDVALANNLSQAFRYKIYGNDDNEEERGSLDRDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEINLNGAVNGGSNSSDDEVVVGEDDELADSKNTVNGTSSSSSNFFSGLTGGDSMNGNSLDFESEKASASHDMGFFRFEAPDNEDLFGDRPLPDWVGWGEPSDLQVAGSSMNPFLDHDESGSNLPSKPQLGSPNPSSPSNGESVPSNGLPTTGDSVEGGGDSNQRAGAVPSLFEEDVEFVGVELEGTEKATEQALQEGIVGEAGPLKTHGVPKVSEKENSEEGSPGVKEFNDANYWRVDQEVAVLE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00956 852 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 816 IPR007587 GO:0019903|GO:0043666
Rops3g00956 852 MobiDBLite consensus disorder prediction 711 765 - -
Rops3g00956 852 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
Rops3g00956 852 Pfam SIT4 phosphatase-associated protein 357 491 IPR007587 GO:0019903|GO:0043666
Rops3g00956 852 MobiDBLite consensus disorder prediction 704 778 - -
Rops3g00956 852 MobiDBLite consensus disorder prediction 803 838 - -
Rops3g00956 852 MobiDBLite consensus disorder prediction 817 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00956 Rops-Chr3 12172089 12182276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00956 K15501 - gmx:100805409 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00676 7 8942455 8952379 Rops3g00956 3 12172089 12182276 PCT