Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00601 ATGGCTGCGCGAGTGGATCTGGATGGCAACCCCATTAAGCCAATTACCATTTGCATGATTGGTGCCGGAGGGTTCATTGGGTCCCACCTCTGTGAGAAGCTTATGTCGGAGACACCACACAAGGTGCTTGCTTTGGATGTTTACAATGACAAAATCAAGCACCTTTTGGAACCAGATACGCATCCTTGGAATGGTCGAATTCAATTTCACCGCCTTAATATCAAGCAGGATTCAAGGCTTGAGGGTCTCATCAAAATGGCAGATCTGACTATTAATCTTGCTGCTATATGCACCCCTGCCGATTACAACACGCGCCCTTTGGACACCATTTACAGCAATTTCATTGATGCACTTCCAGTGGTGAAGTACTGTTCCGAAAACAGTAAGCGTCTGATTCATTTTTCTACCTGTGAAGTGTATGGGAAAACGATTGGAAGCTTTCTTCCAAAGGATAGCCCTCTTCGTCAGGATCCTGCATACTATGTTCTTAAAGAAGATGAGTCTCCTTGCATTTTTGGTCCAATTGAAAAGCAGAGATGGTCCTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTGAGGCCTTTTAATTGGATTGGACCAAGAATGGATTTTATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTGGCATGCTTTAGCAATAACCTCCTCCGCAGAGAGCCCCTCAAGCTTGTGGATGGTGGCCAATCTCAGAGAACTTTTATTTATATTAAGGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGGGCCAAAGGGCATATTTTCAATGTGGGTAACCCAAACAATGAGGTCACAGTTAGGCAGCTTGCTGAAATGATGACTCAGGTTTACTCAAAGGTCAGTGGAGAACCATCTTTGGAAAGTCCTACAATTGATGTGAGCTCCAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAATAGGCAGCTTGGCTGGAATCCTAAGACCTCACTTTGGGACCTGCTTGAATCCACTCTAACCTATCAGCACAGGACTTATGCTGAAGCCATTAAGAAAGTCATTGCAAAGCCTGTGGCAAGTTAA 1161 0.4419 MAARVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDTHPWNGRIQFHRLNIKQDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARAKGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSGEPSLESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00601 386 Pfam NAD dependent epimerase/dehydratase family 17 287 IPR001509 -
Rops7g00601 386 Gene3D - 15 377 - -
Rops7g00601 386 CDD Arna_like_SDR_e 16 371 IPR045869 GO:0016831
Rops7g00601 386 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 16 371 - -
Rops7g00601 386 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 15 378 - -
Rops7g00601 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 369 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00601 Rops-Chr7 7696882 7704859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00601 K12449 - gmx:100792879 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00601 7 7696882 7704859 Rops7g00601 7 7696882 7704859 ECH
Rops7g00601 7 7696882 7704859 Rops3g01036 3 13561983 13565155 PCT