Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00579 ATGAATGTGTCAGACATGATTTCTTGCTTTAGCGAGAACGCAGTGAATGTGTCACATTCCTCATGTTCTAGCTATTCAAACAATGCTTGCATATCTCCTAGCCTTGCACCTTCAACACAAAATTCAGTTTCCTCTGTCTACAAAACAATCCTCTCCAACCAAAAACAGCTTTTGATCACAGTCACTTGGTGTAAGAGTCACTCCAATCAAGGACTCTCCATAAGCTTTGGTGACCAAGATCCAGTAGCATCAACTTTCAGACTCAACACCAATTCAAGGTTTTTCAGGAAGAAGAAAGGAAGCAAGTTGCTTGAATCTGATGAGTCAAAAGTTGAAGTCTTTTGGGATCTTTCCAACGCCAAGTATGACACTGGCCCTGAACCTGTTGATGGGTTTTCTGTTGCAATTCTCGTGGATGCAGAGATAGGCCTAATTCTTGGTGACATGGCTGAAGAAACAGTGACCAAGAAGCTCAAACATAGAACCCTTTTGGCTAAAGTCTCACTATTATCACGAAGAGAACATTGTTCTGGCAACACCCTTTACACAACTAAGGCTCAGTTCTGTGACAGTGGCACTTGGCATGACATTTTGATCAGATGCAGTGGAGAAAATGAGGGTTTCAAGTCTCCTGTTCTGTCTGTCAGTATTGATAAGAAGACAGTGATTCGTGTGAAGAGGCTTCAGTGGAATTTTAGGGGCAACCAAACAATTTTTGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGTATGCAGTTTTTATGTTCAGGACTAGGAGTGGGTTGGATAGCAGATTGTGGTTAGAGGAGAAATCAGTACTGAAAGATAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGAACACATAA 912 0.4156 MNVSDMISCFSENAVNVSHSSCSSYSNNACISPSLAPSTQNSVSSVYKTILSNQKQLLITVTWCKSHSNQGLSISFGDQDPVASTFRLNTNSRFFRKKKGSKLLESDESKVEVFWDLSNAKYDTGPEPVDGFSVAILVDAEIGLILGDMAEETVTKKLKHRTLLAKVSLLSRREHCSGNTLYTTKAQFCDSGTWHDILIRCSGENEGFKSPVLSVSIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKSVLKDKDRVEFSLLIYACKNT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00579 303 PANTHER EXPRESSED PROTEIN 6 301 IPR008586 -
Rops7g00579 303 Pfam Plant protein of unknown function (DUF868) 38 301 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00579 Rops-Chr7 7362570 7364156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00579 3 302 EF-hand Containing Proteins AT5G28150 36.964 1.69e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00579 - - gmx:100798692 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00579 7 7362570 7364156 Rops7g00579 7 7362570 7364156 ECH
Rops7g00579 7 7362570 7364156 Rops3g01052 3 13952959 13954566 PCT