Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01052 ATGGTTTCTTGTTTTAGTGAGAATGCAGTGAATGTGTCTCATTCATCATGTTCTAGCTATTCAAACAATGCTTGTATCTCTCCAAGCCTTACACCTTCAATTCAAAACTCAATTTCAAGTGTCTACAAACTAGTTCTCTCAACTTTAAAGCAACTCTTGATCACTGTCACTTGGTGTAAGAGCCACTCCAACCAAGGACTCTACATAAGCTTTGGTGAAGATGACCCTGCAGCTGTTGCACCCTTCAGACTTAACACCAATTCACGGTTTTTCAGGAAGAAGAAAGGTAGCAAATTATTTGATTCTGATGAGTCAAAGATCGAGGTATTCTGGGATCTTTCAAATGCCAAATATGATGCTGGAGCTGAACCTGTTGAAGGGTTTTATGTTGTGATTCTTGTTGATTCTGAAATAGGCCTTGTTCTTGGTGATGTGGCTGAAGAAGCAGTGTTCAAAAAGTTCAAAATTAACACCCCTACGGCTAAGGTCTCACTGTTATCAAGAAGAGAGCATTGTTCAGGCAACACCCTTTATACAACTAAGGCTCAATTCTGTGACACTGGAACATGGCATGATGTTTTGATCAAATGCAGTGTTGAAAATGAAGGTTTCAAGTCTCCAGTTTTATCAGTGTGCATTGATAAGAAGACAGTGATTCGTGTAAAGAGGCTGCAGTGGAATTTCAGGGGTAACCAGACAATTTTTGTTGATGGGTTGCTAGTTGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAATCCAGCTTCTGGGTATGCAGTGTTCATGTTCAGAACTAGGAGTGGTTTAGATAGCAGATTGTGGTTAGAGGAGAAGACTTCAAAGAAAGATAAAGACAGAATTGAATTCTCCTTGTTGATCTATGCCTGTAAGAGCTCATAA 900 0.3967 MVSCFSENAVNVSHSSCSSYSNNACISPSLTPSIQNSISSVYKLVLSTLKQLLITVTWCKSHSNQGLYISFGEDDPAAVAPFRLNTNSRFFRKKKGSKLFDSDESKIEVFWDLSNAKYDAGAEPVEGFYVVILVDSEIGLVLGDVAEEAVFKKFKINTPTAKVSLLSRREHCSGNTLYTTKAQFCDTGTWHDVLIKCSVENEGFKSPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPASGYAVFMFRTRSGLDSRLWLEEKTSKKDKDRIEFSLLIYACKSS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01052 299 Pfam Plant protein of unknown function (DUF868) 34 297 IPR008586 -
Rops3g01052 299 PANTHER EXPRESSED PROTEIN 2 297 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01052 Rops-Chr3 13952959 13954566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01052 3 298 EF-hand Containing Proteins AT5G28150 38.796 8.51e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01052 - - lang:109353379 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00579 7 7362570 7364156 Rops3g01052 3 13952959 13954566 PCT