Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00563 ATGGAATTGGGAAGCATAATGCACTTCCTTCAGGACAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAGATACTGAGGGTTCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATATTGAATCTGCTACTCGACGTTTACACACTGAGATCACGGGGAAGGACTTATTTAACTTGCTGAGGGAAAATCTTGGCACAAAATTCAATTCTTTTGTCTCTGAAAAGTTCACTCTGGTGCCTGGGGACATTTCTCAAGAGGACTTGAATTTGAAGGACTCCATTCTGGTGGAAGAGATTTGCAATCAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAACTTCGATGAAAGATACGATGTTGCATTGGGTATAAATACATTAGGAGTTAAGCATGTTTTGAGCTTCGCCAAAAAATGTATTAAACTAAAGGTGCTTGTCCACGTATCAACAGCTTATGTATGTGGCGAGAGAGAAGGACTCATAGTAGAGGATCCACATCACTATGGTGTGTCACTAAATGGAGTGCCCGGACTAAGCATTGATACGGAAAAGAAAGTGGTCGAAGAAAAATTGAATCAGCTTCGAGAAGAGGGAGCAACTGAACGTGATATTGAAGTAACCATGAAGGACTTGGGTATGAAAAGAGCAACTTTATATGGATGGCCAAACACGTACGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTTCGAAGGGAAACATGTCTGTTGTTATTGTACGTCCCTCGATAGTTACTAGCACATACAAAGAACCTTTCCCTGGTTGGGTTGAAGGTTTAAGAACCATAGACAGCGTAATTGTTGCTTATGGTAAAGGAAAATTAGGATGCTTCGTTGCGGATGTTAAGGCAGTTTGTGACGTGATACCAGCTGACATGGTGGTGAATTCAATGCTAGTGGCCATGGTGGCTCATGCAAATCAACCAAGTGATGTTATATATCACATGGGTTCCTCTGTTAGAAATCCAGTCAGATACTCAAATCTCCAAGACTATGGATTCAGATATTTCACTGCAAAACCATGGATAAACAAGGATGGAACACCTGTTAAGGTTGGCAGAGTAACCATGTTGAGCAACATGGCTAGCTTTCGCAGATATATGTTCATTCGTTACTTGCTTCCGTTAAAGGGACTAGAGCTGGCCAATGCAGCTTTATGCCAACATTTTCAGGAAATGTGTCTTGATCTCAACAGGAAGATCCGTATTGTTATGCGGTTGGCTGACCTTTACCGGCCTTACATATTCTTCAATGGCGTATTTGATGATATGAATACAGAGAAGTTGCTATTAGCAGCAAGAGAAAGCGGGGTAGAGATGGATTTGTTTTACTTTGACCCAAAAATGATTGATTGGGATGACTACTTCTTGAATATCCATTTTCCTGGTGTCATCAAGTATGCTGCCAAGTGA 1473 0.4073 MELGSIMHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDIESATRRLHTEITGKDLFNLLRENLGTKFNSFVSEKFTLVPGDISQEDLNLKDSILVEEICNQTDVIVNLAATTNFDERYDVALGINTLGVKHVLSFAKKCIKLKVLVHVSTAYVCGEREGLIVEDPHHYGVSLNGVPGLSIDTEKKVVEEKLNQLREEGATERDIEVTMKDLGMKRATLYGWPNTYVFTKAMGEMLVGTSKGNMSVVIVRPSIVTSTYKEPFPGWVEGLRTIDSVIVAYGKGKLGCFVADVKAVCDVIPADMVVNSMLVAMVAHANQPSDVIYHMGSSVRNPVRYSNLQDYGFRYFTAKPWINKDGTPVKVGRVTMLSNMASFRRYMFIRYLLPLKGLELANAALCQHFQEMCLDLNRKIRIVMRLADLYRPYIFFNGVFDDMNTEKLLLAARESGVEMDLFYFDPKMIDWDDYFLNIHFPGVIKYAAK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00563 490 CDD FAR_C 390 487 IPR033640 -
Rops7g00563 490 Pfam Male sterility protein 17 318 IPR013120 -
Rops7g00563 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 334 IPR036291 -
Rops7g00563 490 CDD FAR-N_SDR_e 13 361 - -
Rops7g00563 490 Pfam Male sterility protein 391 490 IPR033640 -
Rops7g00563 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 488 IPR026055 GO:0080019
Rops7g00563 490 Gene3D - 8 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00563 Rops-Chr7 7143840 7149839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00563 110 487 Acyl Lipid Metabolism Gene Families AT4G33790 62.169 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00563 K13356 - gmx:100789566 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00563 7 7143840 7149839 Rops7g00563 7 7143840 7149839 ECH
Rops7g00563 7 7143840 7149839 Rops3g01075 3 14412300 14413685 PCT