Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01075 ATGGACACAGGAACGGTTGAACATTTTCTCAAGGCAAAGACTATTTTTGTCACTGGTACAACTGGTTACTTAGCGAAAGTTTTTGTGGAAAAGATACTAAGAATCCAACCAGAGATACAAAAACTGTATCTTCTCATAAGAGCTTTAAACACTGATTCGGCTGCACGTCGCTTGCAAAACGAGGTCATTCAGACAGATTTGTATAGAGTGCTAAGACAAAAGTGGGGTGAAGATTTTGATTCTTTCATATCAGAGAAGGTTGTGGTTATAGCTGGAGATGTTGCTGTCGAGAATTTGGGATTAAAAGATGAAAATCTTAAAAATGAGATGTTGGAAGAGATAGATATTATTGTCAATTGTGCAGCATCTACCAAATTTGATGAAAGATTTGACATCTCAATGGGTGTTAATACAATGGGCGCTTTACATGTCTTAAACTTCGCAAAGAGTTGTCATAGAATAATGCTTCTTGTCCACATATCAACTGCTTATGTGTGCGGAGAGGCTAAGGATAGAGAAGCAATTTTAGAGAAACCATTTGAGATGGGTCAAACCCTGAAAGGGACCTCAAAGTTAGACATACAAGCAGAAATGAATTTATTGGGAAAGAAAATAGATGAACTCCAAGCAAAGAATGCTGATGAAAACACAATCAAATATGCAATGAAAGATTATGGAATTGAAAGATCAAAGTTGTACGGTTGA 705 0.366 MDTGTVEHFLKAKTIFVTGTTGYLAKVFVEKILRIQPEIQKLYLLIRALNTDSAARRLQNEVIQTDLYRVLRQKWGEDFDSFISEKVVVIAGDVAVENLGLKDENLKNEMLEEIDIIVNCAASTKFDERFDISMGVNTMGALHVLNFAKSCHRIMLLVHISTAYVCGEAKDREAILEKPFEMGQTLKGTSKLDIQAEMNLLGKKIDELQAKNADENTIKYAMKDYGIERSKLYG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01075 234 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 178 IPR036291 -
Rops3g01075 234 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 229 IPR026055 GO:0080019
Rops3g01075 234 Gene3D - 2 191 - -
Rops3g01075 234 Pfam Male sterility protein 17 206 IPR013120 -
Rops3g01075 234 Coils Coil 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01075 Rops-Chr3 14412300 14413685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01075 1 234 Acyl Lipid Metabolism Gene Families AT3G44540 53.390 7.29e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01075 K13356 - pcin:129302723 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00563 7 7143840 7149839 Rops3g01075 3 14412300 14413685 PCT