Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00562 ATGAAATGGCTGGCACTGGCTTCCACTCACACCATTCCTGTTCAGTCTGAGAAGTCAGTTTGGTTTCTTTCCACTTCCTTCTCATACAATTTATTTTCTCCAATGGAGGACGTAGGAAGTATACTCCACTTTCTTCAGGACAAGACCATTTTAATTATTGGAGCCACTGGTTTTCTAGCCAAAATTTTCTTGGAGAAGATATTGAGGGTTCAACCAAATGTTAAGAAGATTTATCTTCTTTTAAGAGCCTCAGATGCCAAATCTGCCTCTCGTCGCTTGCACAATGAGATCTTAGCAAAGGACTTATTTAATTTGCTAAAGGAAAAAATGGGAGCAAATTTTACGTCCTTCATTTCGGAAAAGTTGACTCTGATTCCTGGGGACATTACTTTTGAGGACTTGGGTTTGAAAGATCCCATTCTAAGGGAAGAGATTTGCAATCAAACAGATGTTATTGTTAATTTGGCTGCAACTACTAACTTTGACGAAAGGTACGATATAGCATTGGATCTAAACACCTTTGGAGCTAAGCATGTCATGAACTTCTCCAAACATTGTATTAAACTCAAAGTGCTTGTCCATGTATCAACAGCTTATGTATGTGGTGAGAGAGGTGGACTCATACTAGAGAACCCATATCATTTTGGTGATTCACTAAATGGAGTGCCTGGATTAGACATCCATGAAGAAAAGAAATTTGTCCAAGACAAATTGGATGAGCTACGAGAGCAGGGAGCCTCAGAAGATGAAATTAAAATGGCCATGAAGGACTTGGGTATTAGCAGGGCAAAGGTGTATGGATGGCCAAACCCATACGTATTTACAAAGGCAGTAGCAGAGATGCTTGTGGAAGAGTTAAAAGGAAGCCTATCTGTTGTTATTTTGCGACCTACCATTGTTACCAGTACATTCAAAGAACCATTTCCTGGTTGGGTAGAGGGTGTAAGAACCATTGACAGTTTAGCAGTTACTTATGGGAAAGGAAAACTAACATGCTTCCTTGGAGATCTCTATGGAGTAGTCGATGTGATACCAGCTGACATGGTGGTGAATGCAATGCTAGTGGCCATTGTAGCTCATGCAAATCAACCAAGTGATGCCATATATCACGTGGGTTCCTCCGTTAGAAATCCAGTCAGATACTCAAATCTACAAGACTATGGATTAAGATATTTCACAGCAAAACCATGGATAAACAAGGATGGAACATCGGTTAAGGTTGGCAGAGTAACTGTGCTCACTGACATGGCTAGCTTCCGGAGATATGTGTTCATCCGCTACCTGCTTCCTTTAAAGGGACTTAAGCTGGCCAATACGGCATTGTGCAAGTATTTTCAGGGAACATATCTTGAACTCAACAGGAAGATCCAGATTGTGATGCGTTTGGTGGAACTTTACAGGCCTTACTTGTTCTTCACTGGCATATTTGATGATATGAACACAGAGAAGTTGCGGATTGCAGCAAGACAAGGTGAGACAGAGACAAATTTGTTTTACTTCGACCCTAAAGAGATCAATTGGGATGATTACTTTATGAACACCCATATCCCCGGCATTGTCAAGTACATTTTCAAGTGA 1578 0.4075 MKWLALASTHTIPVQSEKSVWFLSTSFSYNLFSPMEDVGSILHFLQDKTILIIGATGFLAKIFLEKILRVQPNVKKIYLLLRASDAKSASRRLHNEILAKDLFNLLKEKMGANFTSFISEKLTLIPGDITFEDLGLKDPILREEICNQTDVIVNLAATTNFDERYDIALDLNTFGAKHVMNFSKHCIKLKVLVHVSTAYVCGERGGLILENPYHFGDSLNGVPGLDIHEEKKFVQDKLDELREQGASEDEIKMAMKDLGISRAKVYGWPNPYVFTKAVAEMLVEELKGSLSVVILRPTIVTSTFKEPFPGWVEGVRTIDSLAVTYGKGKLTCFLGDLYGVVDVIPADMVVNAMLVAIVAHANQPSDAIYHVGSSVRNPVRYSNLQDYGLRYFTAKPWINKDGTSVKVGRVTVLTDMASFRRYVFIRYLLPLKGLKLANTALCKYFQGTYLELNRKIQIVMRLVELYRPYLFFTGIFDDMNTEKLRIAARQGETETNLFYFDPKEINWDDYFMNTHIPGIVKYIFK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00562 525 CDD FAR-N_SDR_e 48 396 - -
Rops7g00562 525 PANTHER MALE STERILITY PROTEIN 2-RELATED 41 525 IPR026055 GO:0080019
Rops7g00562 525 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 373 IPR036291 -
Rops7g00562 525 Pfam Male sterility protein 427 525 IPR033640 -
Rops7g00562 525 Gene3D - 43 410 - -
Rops7g00562 525 CDD FAR_C 425 524 IPR033640 -
Rops7g00562 525 Pfam Male sterility protein 53 353 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00562 Rops-Chr7 7124125 7130536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00562 145 524 Acyl Lipid Metabolism Gene Families AT4G33790 60.789 1.02e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00562 K13356 - gmx:100788680 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00562 7 7124125 7130536 Rops7g00562 7 7124125 7130536 ECH
Rops7g00562 7 7124125 7130536 Rops3g01081 3 14540951 14544289 PCT