Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01081 ATGACTAATGTTGTTCTGGCTATTGTTATTTTTGTAGTTTTTGTGGAGAAGATATTAAGGGTTCAGCCAGACATAAAAAAGTTATACCTTCTTTTAAGAGCAGCAAATCCTCATGTAGCTACCCAACGCCTGCACGATGAAGTAATTGCCAAGGACTTGTTCAGTGTGCAACGCGATAAGTGGGGTGCAAAATTTGGTTCCTTCATATCTGAGAAAGTGATTGCAGTTGCTGGTGATGTTTCTCTTGAGAATCTGGGACTTGAAAACTTAAACCTGAGGAAAGAGATGTTGGAAGAGATAGATATCATAGTACACATTGCTGCCACTACCAAGTTTGACGAGAGTTTCGATATTGCGATGGGTATTAATACGATGGGAGCTCTTCATGTTCTGAACTTCACTAAGAATTGTCGTAGAGTTGAAGTTCTTCTCCACGCATCTACCGCTTATGTATGCGGAGAGGCTCAAGGACTTGTTCCTGAGGAACCTTTTCGTATGGGTCAGACGCTAAAAGGGTCCTCAAGATTGGATATCAATTTAGAAAAGCAGTTAATTGAGGAAAAATTGAATGAACTCCGAGCACAAAATGCTAATGATCTGCCTTTAATCATCGCACGCCCCACTGTAATATTCAGCACTCACTCCGAACCATTCCCTGGTTGGATTGAAGATGTGAGAACTATTGACGTTATGATTGTCATGTATGGTAAAGGAGCATTAAGAAGCTCTATTGGTCATGCGAAGACAGTTATAGATGTGGCAAGTTACCCTTAA 774 0.407 MTNVVLAIVIFVVFVEKILRVQPDIKKLYLLLRAANPHVATQRLHDEVIAKDLFSVQRDKWGAKFGSFISEKVIAVAGDVSLENLGLENLNLRKEMLEEIDIIVHIAATTKFDESFDIAMGINTMGALHVLNFTKNCRRVEVLLHASTAYVCGEAQGLVPEEPFRMGQTLKGSSRLDINLEKQLIEEKLNELRAQNANDLPLIIARPTVIFSTHSEPFPGWIEDVRTIDVMIVMYGKGALRSSIGHAKTVIDVASYP* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01081 257 PANTHER MALE STERILITY PROTEIN 2-RELATED 192 253 IPR026055 GO:0080019
Rops3g01081 257 Pfam Male sterility protein 13 254 IPR013120 -
Rops3g01081 257 Coils Coil 175 198 - -
Rops3g01081 257 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 252 IPR036291 -
Rops3g01081 257 Gene3D - 12 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01081 Rops-Chr3 14540951 14544289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01081 13 253 Acyl Lipid Metabolism Gene Families AT3G44560 45.775 3.26e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01081 K13356 - gmx:100793736 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00562 7 7124125 7130536 Rops3g01081 3 14540951 14544289 PCT