Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00537 ATGGCCAGGATCAGATCAGTAATGCAAAGCTGTTCCTTCCTCTTCAGAGTGCTATTGCTGCTTCTAACAATTTCAGATTTGTTTGTGCAAACCCGTGGCCTTGATTTTGGAATCAACTATGGACAGATAGCCAACAATCTTCCTTCTCACTCTCGTGTGGCTAGTCTTATAAACTCTCTGAATGTCAGCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAAATGTAGAATTCATTATAGGACTTGGAAACGAGGATCTTCAGAGTACGAGAGACCCTTCCAAGGCACAGAGCTGGGTTCAACAACATGTTCAACCTTACATTTCACAAACCAAAATCACTTGTATTCTTGTAGGAAATGAGATCTTCACTTTGAATGATACTCAGCTCATGATAAACCTTCTCCCTGCAATGCAATCTGTGTATAATGCCCTTGTTAATCTTGGACTATCCCAACAAGTTACTGTCACAACTGCTCACTCTTTCAACATTTTAGCCAACTCATTCCCTCCTTCATCTGGGGCTTTCAGGCAAGATCTGATGCAATATATCCAACCCCTTCTTAACTTTCATGCTCAAATCAAATCACCCTTCCTCATCAATGCATATCCCTTTTTTGCATACAAGGGTGACCCGGATAATATCCCTTTAAACTATGTGCTGTTTCAGCCAAATGCTGGGTCCATCGATCCAAATACCAATTTACATTATGACAACATGTTGTATGCTCAAATTGATGCTGTCTACTCTGCCATCAAAGCATTGGGGCATACCAATATTGAAGTCAGGATTTCAGAAACAGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCACAGAATGCAGAAATATATAATAGTAATTTGTTGAAGAGGATACAGCAGAAGCAAGGCACTCCTGCAAATCCATCTATTCCAATTGATATTTATGTCTTTGCACTTTTTAATGAAAATTTGAAGCCTGGTCCTGTATCAGAGAGAAACTATGGCCTTTATTATCCTGATGGTACCCCAGTTTATAACATTGGATTACAAGGATATCTTCCAGAAATGGTCATAGAATCCAAATCCAATGCTTTGTCCATCAATTTTCTCATCTACATACTTTTATGCTTGAGGAAGTTGTTGAAGGGAGACAAAAGCAACATAGCTTTTTATCTGATTTCGAAGGCAAATCCTGCACTTTCCGTATGCAGCCATGGGGAGCAATTGTTCGAGGCATAG 1254 0.4011 MARIRSVMQSCSFLFRVLLLLLTISDLFVQTRGLDFGINYGQIANNLPSHSRVASLINSLNVSRIKLYDADPNVLSAFSNSNVEFIIGLGNEDLQSTRDPSKAQSWVQQHVQPYISQTKITCILVGNEIFTLNDTQLMINLLPAMQSVYNALVNLGLSQQVTVTTAHSFNILANSFPPSSGAFRQDLMQYIQPLLNFHAQIKSPFLINAYPFFAYKGDPDNIPLNYVLFQPNAGSIDPNTNLHYDNMLYAQIDAVYSAIKALGHTNIEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIQQKQGTPANPSIPIDIYVFALFNENLKPGPVSERNYGLYYPDGTPVYNIGLQGYLPEMVIESKSNALSINFLIYILLCLRKLLKGDKSNIAFYLISKANPALSVCSHGEQLFEA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00537 417 Gene3D Glycosidases 35 358 - -
Rops7g00537 417 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
Rops7g00537 417 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
Rops7g00537 417 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 355 IPR044965 GO:0004553|GO:0005975
Rops7g00537 417 FunFam Glucan endo-1,3-beta-glucosidase 14 34 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00537 Rops-Chr7 6875186 6879054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00537 86 382 Glycoside Hydrolase AT2G27500 67.450 2.37e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00537 - - gmx:100786020 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00537 7 6875186 6879054 Rops7g00537 7 6875186 6879054 ECH
Rops7g00537 7 6875186 6879054 Rops3g01116 3 15286002 15288064 PCT