Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01116 ATGGCCAATATCAGATCAGTAATGACAAGCTGTTCCTTCTTCTTCAGCTCAGTGCTTTTGCTTCTTCTCATTATTTCTGATTCATTTGTGCAAATCCGTGGCCTTAGTTTTGGAATCAACTATGGACAAATAGCCAACAATCTACCTTCTCCTTCTCAAGTGGCTGTTCTTATAAAATCAATGAACGTGAGTAGGATCAAACTCTATGATGCTGATCCAAATGTTCTAGTTGCCTTCTCCAAATCAAATGTGGAATTTGTTGTAGGACTTGGAAATGAGTATCTGCAGAACATGACAAATCCTTCTAAAGCTCAAACTTGGATTCAGCAGCATGTTCAACCTTACCTTTCACAAACCAAAATCACATGCATCACTGTAGGAAATGAAGTCTTCAATACCAATGATACTCAGCTAATGTTGAACCTTCTCCCTGCAATGCAAAATGTTCAAGGGGCCCTTGTTAATCTTGGACTAGACCAACTAGTTACTGTGATTACTGCTCATTCATATAACATATTAGCCAATTCCTACCCTCCTTCATCTGGGGCTTTTAGGCAAGATTTGATACAATATATCCAACCCCTTCTTGACTTTCTTGCACAAATCAACTCACCTTTCGTCATTAATGCATATCCTTTTTTTGCATACAAAGACAATCCAAATGAGGTTCCTTTAAACTATGTACTTTTTCAACCAAATCAAGGTATGGTTGATCCCAATACCAACTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCAGCCATCAAAGTGTTGGGGCATACCAATATTGAAGTAAGGATTTCAGAAACAGGTTGGCCTTCCAAGGGTGACCCTAATGAGGTTGGAGCTACACCACAAAATGCTGAATTGTATAATGGTAATTTGCTCAAAAGGATAGAGCAGAAACAAGGCACTCCTGCAAATCCATCAGTTCCAATTGATATATATGTGTTTGCACTTTTTAATGAGGATTTAAAGCCTGGTCCTGCATCAGAGAGAAACTATGGCCTTTACTATCCTGATGGTACTCCAGTTTATAACATTGGATTGCAGGGTTATCTCCCAGAGATGATTATGGTATCCAAATCCAACATTTTGTCCGTCAATTGTCTTGTCCTTATAATTACATGTTTGATCTTTGCTTGGGAGCCTTCAAGATTGCAATCAAAAGAAAGGAGGGCTCAAAGGAAACACAGGAAATCCTATACGTCATTCTTTTACAATAGAAAGTTATTCAAGGTGAGGAAAATTTTAAATTGTCCTTTAATTTTTTTTCTTTTCTTTTTTGTAATTTTCCCTGCCTTTTATTTGCAAAGTAATAGATATTTTCTCCGTTAA 1353 0.3718 MANIRSVMTSCSFFFSSVLLLLLIISDSFVQIRGLSFGINYGQIANNLPSPSQVAVLIKSMNVSRIKLYDADPNVLVAFSKSNVEFVVGLGNEYLQNMTNPSKAQTWIQQHVQPYLSQTKITCITVGNEVFNTNDTQLMLNLLPAMQNVQGALVNLGLDQLVTVITAHSYNILANSYPPSSGAFRQDLIQYIQPLLDFLAQINSPFVINAYPFFAYKDNPNEVPLNYVLFQPNQGMVDPNTNLHYDNMLYAQIDAVYAAIKVLGHTNIEVRISETGWPSKGDPNEVGATPQNAELYNGNLLKRIEQKQGTPANPSVPIDIYVFALFNEDLKPGPASERNYGLYYPDGTPVYNIGLQGYLPEMIMVSKSNILSVNCLVLIITCLIFAWEPSRLQSKERRAQRKHRKSYTSFFYNRKLFKVRKILNCPLIFFLFFFVIFPAFYLQSNRYFLR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01116 450 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 388 IPR044965 GO:0004553|GO:0005975
Rops3g01116 450 Gene3D Glycosidases 36 359 - -
Rops3g01116 450 FunFam Glucan endo-1,3-beta-glucosidase 14 35 359 - -
Rops3g01116 450 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
Rops3g01116 450 SUPERFAMILY (Trans)glycosidases 37 353 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01116 Rops-Chr3 15286002 15288064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01116 87 387 Glycoside Hydrolase AT2G27500 68.543 2.13e-161 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01116 - - gmx:100786020 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00537 7 6875186 6879054 Rops3g01116 3 15286002 15288064 PCT