Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00534 ATGACCGAGGTCCTCCATTTTGCTTCATCACCAAGGACAACTACTTCTTCAACATCAACTTCAACTTCAACCTCTTCTTCTTCTTCTTCTTCCTCACCCCTCTCTTCTTCATTCTCTTTCCATGCCATTTTCCGACCTCCCTCTCAGCCCCACCTTTCACTTTTGGCTCTTCTGGTGACCCTTTTCAGGAAATCCTTTGTTACTCGCAAGAGTGGCACCAAGGAACTCTGCTCCATGGACATTGGTTCCCCAACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTTGAACCTGAAGTGCCCAGAAGACCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCGACAGAATCCATGCAATTATCTTATGACTCAAGAGGGAACAGTGTGCCAACAATTCTGCTGCTAATGCAAAGGCATCTGTATACTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAATGCAGATAATACTCAAGAGGAACAAGTTAGGGATCAATTGAACTTGGGATTGGTCCCAGAAGGCATTGATGTACATTGTTTGGCCGGACTAATTAAGGCATGGTTTAGGGAACTTCCTACAGGCGTTCTGGATTCATTATCTCAAAAGCAGGTAATGCAATGCCAGACTGAGGAGGAATGTGTTGAACTAGCAAGGCATCTACCTCATACTGAAGCTGCACTCTTGGACTGGGCCATCAATCTGATGGCTGATGTCGTCCAACAGGAACATCTTAATAAGATGAATGCACGTAACATTGCGATGGTTTTTGCGCCAAACATGACCAAGATGGCAGACCCTTTCACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTATATTAAGGACGCTGCGAGAAAGAAAGGATTCTGTGGTAGAATCTAATCCTAGATTGTATTTAGAACCTTCTGATGAGAATGAGCACCCCAGACTTTTGGAGTCCTGCCAACAAGCTACTGCTGCAGAAAATGAAGAGGCTCGGGAAAACTTTGTTTCGGAGAAAACTGTCTTAGAATGTTCCCCAGAACCACTCCAAAACAACTCCTCAATTGGAGGAGAATCTGCAAGTTTGGTAAGTTCTTCTGAGAATCTAGTTTGCAATGAGGATTTGTATTGCGAGTTTCCACCCAAAGGAAACATGGGGAAGAATAAGTCAGGCCAATCAAGTAGTTCAAATGCTAGAAAAGGGTCCAAAAAGACCAGAGGACAGCAACCTGTGAACCGTCGAACAGTGCCAGTTGAGAAAAAGGGAATGGGGAGTTCGAGCCGCACAGATTCAAGATCTGAGCGAGTAGAAGCCTGGCGGTGA 1365 0.4498 MTEVLHFASSPRTTTSSTSTSTSTSSSSSSSSPLSSSFSFHAIFRPPSQPHLSLLALLVTLFRKSFVTRKSGTKELCSMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYTQGGLQVEGIFRINADNTQEEQVRDQLNLGLVPEGIDVHCLAGLIKAWFRELPTGVLDSLSQKQVMQCQTEEECVELARHLPHTEAALLDWAINLMADVVQQEHLNKMNARNIAMVFAPNMTKMADPFTALMYAVQVMNFLKTLILRTLRERKDSVVESNPRLYLEPSDENEHPRLLESCQQATAAENEEARENFVSEKTVLECSPEPLQNNSSIGGESASLVSSSENLVCNEDLYCEFPPKGNMGKNKSGQSSSSNARKGSKKTRGQQPVNRRTVPVEKKGMGSSSRTDSRSERVEAWR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00534 454 SMART PBD_5 81 115 IPR000095 -
Rops7g00534 454 CDD RhoGAP 143 299 - -
Rops7g00534 454 MobiDBLite consensus disorder prediction 1 34 - -
Rops7g00534 454 MobiDBLite consensus disorder prediction 400 426 - -
Rops7g00534 454 MobiDBLite consensus disorder prediction 396 454 - -
Rops7g00534 454 Gene3D CRIB domain 78 111 IPR036936 -
Rops7g00534 454 Pfam P21-Rho-binding domain 80 106 IPR000095 -
Rops7g00534 454 ProSiteProfiles CRIB domain profile. 81 94 IPR000095 -
Rops7g00534 454 SMART RhoGAP_3 140 303 IPR000198 GO:0007165
Rops7g00534 454 MobiDBLite consensus disorder prediction 439 454 - -
Rops7g00534 454 CDD CRIB 79 119 - -
Rops7g00534 454 Gene3D Rho GTPase activation protein 114 311 IPR008936 -
Rops7g00534 454 ProSiteProfiles Rho GTPase-activating proteins domain profile. 126 311 IPR000198 GO:0007165
Rops7g00534 454 Pfam RhoGAP domain 143 277 IPR000198 GO:0007165
Rops7g00534 454 FunFam Rho GTPase-activating protein 5 111 304 - -
Rops7g00534 454 SUPERFAMILY GTPase activation domain, GAP 121 300 IPR008936 -
Rops7g00534 454 PANTHER MKIAA1688 PROTEIN 1 421 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00534 Rops-Chr7 6842948 6846919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00534 - K20642 gmx:100776004 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00534 7 6842948 6846919 Rops3g01131 3 15758008 15761421 PCT