Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01131 ATGACCGAGGTGCTACACTCTCCAACATCAACAACATCACGTTTCTCTTCATCTTCATCACCACCAACCACTCCTTCCTCTGATAATGGCATTCTCATTCTCAGCAGCACTGACCAAGAACCACCCTCTTCTTCTTCTTCTTCTTTAACCGTGGCGGTGGATGGTTTTTCTACGGTTACTGACTGTGACACAGAGGAGATCACGGTCACAGACAGGGAAAGGACACAACAGGAGTTGTCCCTTTTGGCAATTCTTGTGACCCTTTTCAGGAAATTCTTGATTGGTTGCAATAGTGAAGGGAGGAAGCTTTGTGCCATGGAGATTGGTTGGCCCACTAACGTGCGCCATGTTGCGCATGTTACCTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTTGAACCTGAAGTCCCCAGAAGGCCTCCAAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAATTATCATATGACACAAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGGCACTTGTATGCTCAAGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATTAATGCAGACAATAGCCAAGAGGAATATGTTAGGGATCAATTAAACAGGGGATTGGTCCCTGAAGGCATTGATGTACATTGTTTGGCAGGACTAATTAAGGCTTGGTTTAGGGAACTGCCTACAGGTGTTCTGGATTCTTTATCACCAGAGCAGGTCATGCAATGTCAGACTGAAGAGGATTGTGCTGAACTAGCGAGGCAGCTACCTCACACTGAAGCTTCCCTTTTGGACTGGGCTATCAATCTCATGGCTGATGTTGTTCAAGAGGAACATCTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCTGTTCAAGTGATGAATTTCTTGAAGACACTTATATTAAGGACCCTGCAAGAAAGAAAGGATTCTGTGGTAGAATCGTCTCCTGGATTTGATTTAGAGCCTTCTGATGAGAACGGGGACCATAGTGTTTTGGAGTCCTGCCAGCAAGATGTTGCCACAGAAAATGAAGAGGCTGAGGAAACCTTTGTTTGTGAGAAAACTGTGTTAGAATGTTCCCCTGAATTAATCCAAGACAAAATTTCAACTGAAGGAGAATATGGCTGTTCGATAAGCTCTTCTGAGAATCTAGTTTGTGATGAGGATTTGTATTGTGAGTATCCACCCAAAGGAAACATTGGTAAGAGTAAGACTTCCCAATCAAGTAACTCAAGTTCTGAAAAGGAGGCCAAGAAAACCAAAGGCCAGCAACCTGTGATCCATGGAACAGTGGCTGCTGAGAAGAAGAGTATTAGCAATTTGAGCCGCATAGATTCAAGATCAGAGCGGATAGAAGCCTGGAGGTGA 1446 0.4426 MTEVLHSPTSTTSRFSSSSSPPTTPSSDNGILILSSTDQEPPSSSSSSLTVAVDGFSTVTDCDTEEITVTDRERTQQELSLLAILVTLFRKFLIGCNSEGRKLCAMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYAQGGLQAEGIFRINADNSQEEYVRDQLNRGLVPEGIDVHCLAGLIKAWFRELPTGVLDSLSPEQVMQCQTEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLQERKDSVVESSPGFDLEPSDENGDHSVLESCQQDVATENEEAEETFVCEKTVLECSPELIQDKISTEGEYGCSISSSENLVCDEDLYCEYPPKGNIGKSKTSQSSNSSSEKEAKKTKGQQPVIHGTVAAEKKSISNLSRIDSRSERIEAWR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01131 481 SMART RhoGAP_3 167 330 IPR000198 GO:0007165
Rops3g01131 481 CDD RhoGAP 170 326 - -
Rops3g01131 481 MobiDBLite consensus disorder prediction 337 357 - -
Rops3g01131 481 Gene3D Rho GTPase activation protein 141 338 IPR008936 -
Rops3g01131 481 ProSiteProfiles CRIB domain profile. 108 121 IPR000095 -
Rops3g01131 481 Pfam P21-Rho-binding domain 107 133 IPR000095 -
Rops3g01131 481 SUPERFAMILY GTPase activation domain, GAP 148 327 IPR008936 -
Rops3g01131 481 PANTHER MKIAA1688 PROTEIN 1 448 IPR044785 GO:0005096
Rops3g01131 481 Pfam RhoGAP domain 170 304 IPR000198 GO:0007165
Rops3g01131 481 ProSiteProfiles Rho GTPase-activating proteins domain profile. 153 338 IPR000198 GO:0007165
Rops3g01131 481 MobiDBLite consensus disorder prediction 423 460 - -
Rops3g01131 481 SMART PBD_5 108 142 IPR000095 -
Rops3g01131 481 Gene3D CRIB domain 105 137 IPR036936 -
Rops3g01131 481 FunFam Rho GTPase-activating protein 5 138 331 - -
Rops3g01131 481 MobiDBLite consensus disorder prediction 1 50 - -
Rops3g01131 481 CDD CRIB 106 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01131 Rops-Chr3 15758008 15761421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01131 - K20642 gmx:100784019 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01131 3 15758008 15761421 Rops3g01131 3 15758008 15761421 ECH
Rops7g00534 7 6842948 6846919 Rops3g01131 3 15758008 15761421 PCT