Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00516 ATGGGTGTGTTGGAGGAAGAGACTAATTCGAAACCAATCTTGATCCGAGAAGTGTGGGCCTCAAATTTAGAGTCAGAATTCGAGGTTATCCGTGAAGTGATTGATCAATACCCTTTTATCTCAATGGACACTGAATTTCCCGGTGTCATCTTTCGCCCTCATGTGGACCCCACCAAACCTTATCTCCGCCGAAACCTCAAACCTTCCGACCACTACCGTTTCTTGAAGTCCAACGTTGATGCCCTCAACCTCATCCAGGTTGGTCTTACCTTTTCTGACGCCAACGGAAACCTCCCTGACCTCGGAACCGGTAACCGTTTCATCTGGGAGTTCAACTTTTCTGACTTCGATGTCGAGCGTGACGCTCACGCGTCAGATTCCATCGATCTGCTCCGCCGTCAGGGGATCGACTTCCGCCGCAACGCCACCGACGGTGTCGACTCGTCAAGATTCGCTGAACTGATGATGTCGTCTGGACTCGTCTGCAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCGTACGATTTCGGGTACCTGGTTAAGATCCTGACCCGACGGAGCCTGCCAAACGGGTTGGAGGAATTTTTAAGGATGTTGAGGGTGTTTTTCGGAAACAATGTTTATGACATCAAGCACATGATGCGGTTCTGTAAGACCCTGTATGGCGGTCTGGACCGGGTTGCCCGAACCCTCAATGTGAACCGGGAGGTTGGGAAGTGCCATCAAGCCGGGTCTGACAGCTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGATATTTATTTTGTCAACGATGAGCCCCAGAAACATGCTGGGGTATTGTTCGGATTAGAAGTTACCTGTTCTGTGAACTGA 858 0.5058 MGVLEEETNSKPILIREVWASNLESEFEVIREVIDQYPFISMDTEFPGVIFRPHVDPTKPYLRRNLKPSDHYRFLKSNVDALNLIQVGLTFSDANGNLPDLGTGNRFIWEFNFSDFDVERDAHASDSIDLLRRQGIDFRRNATDGVDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRSLPNGLEEFLRMLRVFFGNNVYDIKHMMRFCKTLYGGLDRVARTLNVNREVGKCHQAGSDSLLTWHAFQKMRDIYFVNDEPQKHAGVLFGLEVTCSVN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00516 285 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 14 279 IPR039637 GO:0004535|GO:0030014
Rops7g00516 285 FunFam Putative CCR4-associated factor 1 7 5 282 - -
Rops7g00516 285 Gene3D - 4 281 IPR036397 GO:0003676
Rops7g00516 285 Pfam CAF1 family ribonuclease 18 146 IPR006941 -
Rops7g00516 285 SUPERFAMILY Ribonuclease H-like 15 277 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00516 Rops-Chr7 6651686 6652715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00516 K12581 - gmx:100817875 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00516 7 6651686 6652715 Rops7g00516 7 6651686 6652715 ECH
Rops7g00516 7 6651686 6652715 Rops3g01165 3 16383734 16384597 PCT