Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01165 ATGGGTGTGATGAACGAAGATCCGAACCCAAACCCTAATCCGAAAACCGTTGTGATCCGTGAAGTGTGGGCCTCCAATTTAGAATCCGAATTTCAACTCATTCGTGATCTCATCGACCGTTACCCTTTCATTTCCATGGACACCGAGTTCCCCGGCGTGATTTTCCGTCACCTCCATAACAACCACCGTAACCGTCATCCCTCCGATCACTACCACCTCCTCAAATCCAACGTTGACGCTCTCAACATCATCCAAATCGGCCTCACCCTCTCCGACGCCGCCGGCAACCTCCCTGACCTCGGAACTGCCGACAGCACCTTCATCTGGGAATTCAATTTCTGTGATTTCAACATCGCGCGTGATCCCTACGCGCCTGACTCCGTCGCGCTCCTCAGCCGTCAGGGGATCGATTTCGCCCGCAACGCTGCCGCCGGCGTGGAATCAACCCGTTTCGCCGAGTTGATGATGTCGTCGGGACTCGTCTGCAACGACGTCGTTAGTTGGGTAACGTTTCACAGCGCGTACGATTTCGGGTATTTGGTTAAGATCTTGACCCGACGAAGCTTACCGACCCGGTTGGAGGAGTTCTTGCGGGTCGTGAGGGTTTTTTTTGGGAACAATGTTTATGATGTGAAACACGTGATGCGGTTCTGTGACACTCTCTATGGCGGTTTAGACCGGGTTGCCATGACACTCAATGTGAACCGGGCCGTTGGGAAGTGCCACCAGGCCGGTTCAGATAGCTTGCTGACGTGGCACGCGTTTCAGAAGATAAGAGACACGTTTTTTGTAAAGGATGAACATCAGAAACATGCTGGTGTGTTGTATGGGTTAGAGATGGATAACCTATGTTTTGTTAATTAA 864 0.5174 MGVMNEDPNPNPNPKTVVIREVWASNLESEFQLIRDLIDRYPFISMDTEFPGVIFRHLHNNHRNRHPSDHYHLLKSNVDALNIIQIGLTLSDAAGNLPDLGTADSTFIWEFNFCDFNIARDPYAPDSVALLSRQGIDFARNAAAGVESTRFAELMMSSGLVCNDVVSWVTFHSAYDFGYLVKILTRRSLPTRLEEFLRVVRVFFGNNVYDVKHVMRFCDTLYGGLDRVAMTLNVNRAVGKCHQAGSDSLLTWHAFQKIRDTFFVKDEHQKHAGVLYGLEMDNLCFVN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01165 287 SUPERFAMILY Ribonuclease H-like 18 278 IPR012337 -
Rops3g01165 287 FunFam Putative CCR4-associated factor 1 7 9 282 - -
Rops3g01165 287 Pfam CAF1 family ribonuclease 22 147 IPR006941 -
Rops3g01165 287 Gene3D - 7 282 IPR036397 GO:0003676
Rops3g01165 287 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 17 280 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01165 Rops-Chr3 16383734 16384597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01165 K12581 - gmx:100811298 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00516 7 6651686 6652715 Rops3g01165 3 16383734 16384597 PCT