Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00513 ATGACCAACACCAAGGAATGCGACCACCACGAGGAAGAGCGCCGCCAGCTCCTCCGCCGCATAATAGTTGCCATCCTCGGCTTCATATTCCTCGTACTCCTCGTCATCTTCTTAATATGGATCATCCTACGACCCACGAAACCACGCTTCATCCTTCAAGACGCCACCGTTTTCGCCTTCAACCTTTCCTCCACCGGTGACATACCTTCACCCACCACTCCCACACCCAACACCCTCACACTAACCATGCAAGTTACCCTCTCAGCTCTCAACCCAAATGCCCGAATCGGCATTTACTATAACAAACTCGATGTCTATGCTTCCTACAGAGGCCAACAGATCTCACTCGCCACCGAGCTTCCACCAACCTACCAGGGCCACCGTGACGTCACCGTTTGGTCGCCGTTCCTGTACGGAAACGCCATGCCGGTGTCTCCTTACTTGTTGGAAGTTCTGCGGCAGGACCAGACTTCAGGGGGGGTGTTGGTCAACGTCAAGGTCAACGGAAGGGTTAAATGGAAGGTTGGGACTTGGGTCTCTGGAAGGTACCATGTCTACGTTAACTGTCCAGCGTATATTAGGCTCGCCGGCGATCGGGATAGTAATAGCATCGGAGTTGCTGCTCCGGCGGTGAAGTTTCAGTTTCTGCAAAGTTGTGTTGTTGATGTTTAG 672 0.5283 MTNTKECDHHEEERRQLLRRIIVAILGFIFLVLLVIFLIWIILRPTKPRFILQDATVFAFNLSSTGDIPSPTTPTPNTLTLTMQVTLSALNPNARIGIYYNKLDVYASYRGQQISLATELPPTYQGHRDVTVWSPFLYGNAMPVSPYLLEVLRQDQTSGGVLVNVKVNGRVKWKVGTWVSGRYHVYVNCPAYIRLAGDRDSNSIGVAAPAVKFQFLQSCVVDV* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00513 223 Pfam Late embryogenesis abundant protein 86 189 IPR004864 -
Rops7g00513 223 PANTHER OS05G0367900 PROTEIN 19 203 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00513 Rops-Chr7 6599473 6600363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00513 15 189 EF-hand Containing Proteins AT5G21130 24.157 1.46e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00513 - - pvu:PHAVU_005G120900g 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00513 7 6599473 6600363 Rops7g00513 7 6599473 6600363 ECH
Rops7g00513 7 6599473 6600363 Rops3g01170 3 16464830 16465727 PCT