Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00494 ATGGCCTTGGCAGGTGCTGAATACACTACATGCTGCACTCATACATGGCAAACCTTACCTGAAAAATCATGGGCTAAGTTAGTCAAGATCACAAATATGGTAAAGAAACTTGGACAAGATGACCCCAGACGAGTTATTCATTCTTTCAAAGTGGGATTGGCATTATCATTGATTTCCCTTTTGCAACATTTTCATCCCTCCTTCTATGGGTTTGGGGCCAATCCAATATGGGCGGTTTTTTCAGTCATTTTTGTCCTGGAATTTTCTGTGGGTGCAACACTTGGAAAAGGCTTAAATAGGATGTTGGCAACCGGATTAGCTGGGGCTCTGGGTGTGGCAACCCATAGATTAGCGACTCTTTCTGGGCAGAAGGGAAAGGCTGTATTGACTTCAACCTTTGTCTTTGTGGTAGCTGGAACAGTGACATTTATGAGATTTTCTCCACGACTGAAAGCGAGATACGATTATGGGTTGATCATATTCATTTTGACCTTCTGCTTGGTATCTCTTTCGGATTATACAGATAGTGAACTCCTAGAAATGGCCCTAGAGAGGTTATTGACGATCATCATAGGGAGCTGTTTAGCTATTATGGCTGTTTTGGCAAGATGGGAACCTTGTCATGGTCGATTCAGATTTCGTTACCCTTGGAAGCAATACTTAAAAATTGGGAACCTGACACGATTGTGTGCTTACAGAATCAATGCTCTTAGTGTCTATCTCGACCACTCAGAACAAACCCCGCATGAACTTCGAAGCAGGATTCAAGAGTTATGCACAAATATTAGCTTGGAATCTGCAAATGCCCTTAAAGCATCATCATTGATAATTAGAAAGATGACTAAGTCATCAAGGCCAAATCCCCATGTTGCAAATGCTCAAAATGCAGCTGAATCTCTTAAATCAGTACTGAGAGCAAACCCATGGGAAGGAGCCAATCATCTAGAGATAATACCAGCTGCTGCAGTGGCTTCACTACTTATTGAAGCTGTGATTTTCATTGAGAAAATTTGTCAAGCAGTTGATGAACTAGCATCTCTTGCAAAATTTGTACCTTCTGAATTACTTCACCAGGGAACAGTGCAACCAATTTCCGAACTTAATGGTTCGGCTCATGTTATCACTAGTAATGGTTGA 1137 0.4151 MALAGAEYTTCCTHTWQTLPEKSWAKLVKITNMVKKLGQDDPRRVIHSFKVGLALSLISLLQHFHPSFYGFGANPIWAVFSVIFVLEFSVGATLGKGLNRMLATGLAGALGVATHRLATLSGQKGKAVLTSTFVFVVAGTVTFMRFSPRLKARYDYGLIIFILTFCLVSLSDYTDSELLEMALERLLTIIIGSCLAIMAVLARWEPCHGRFRFRYPWKQYLKIGNLTRLCAYRINALSVYLDHSEQTPHELRSRIQELCTNISLESANALKASSLIIRKMTKSSRPNPHVANAQNAAESLKSVLRANPWEGANHLEIIPAAAVASLLIEAVIFIEKICQAVDELASLAKFVPSELLHQGTVQPISELNGSAHVITSNG* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00494 378 Pfam Aluminium activated malate transporter 36 198 IPR020966 GO:0015743
Rops7g00494 378 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 20 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00494 Rops-Chr7 6306233 6309053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00494 172 348 Miscellaneous Gene Families AT1G08440 37.640 3.87e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00494 K25841 - gmx:100786663 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00494 7 6306233 6309053 Rops7g00494 7 6306233 6309053 ECH
Rops7g00494 7 6306233 6309053 Rops3g01177 3 16583283 16585898 PCT