Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01177 ATGGCATCTCCAAACACAGACCAGGAGAAAGCTGGGGTACTAGGAAGAGTATGGGAACCACTTAAGGCCTTGCCAAAAGTTCTTATGAAGAAGGTGTTGAGCATATATAAGATGTCAAAAAAGATAGCCCAAGATGACCCTAGAAAAGTTATTCATTCACTAAAAGTAGGACTTGCAATCTCTTTGGTGTCTCTATTCTACTACTATCAACCACTATATGAGAATTTTGGTCTATCAGCAATGTGGGCAGTGATGACTGTAGTGGTAGTTTTTGAGTATACAGTTGGAGCCACTTTAGGAAAAGGTTTGAATAGGACAATAGCAACACTGGTGGCTGGTGCTTTAGGTGTTGGTGCTCATTACTTAGCAAGCCTTTCTGGAAAGACAGGGGAACCCATATTGATTGGTGTATTTGTCTTTGTTCAAGCTGCTATAGCATCATTTATAAGGTTCTTTCCCAAAGTGAAGACAAGATATGATTATGGGATGCTTATATTTATCTTGACATTCTCTTTAATATCGGTATCTGGATTTCGTGATGATGAAGTATTACAAATGGCACACAAGAGGTTATCAACAATTTTCATAGGGGGTTCAGCTTGTGTGATGATTTCCATTTTTGTTTGTCCTGTGTGGGCTGGTGAAGAGTTCCACTGTTCAATTGCTCACAAGTTGGAAACACTTGGTGACTTCTTAGAAGCATTTGTGCATGAGTACTTCGAAAAATCAAATAAAGGAGATTCTAAAGATAACGAGTCTTTTCTTGAAGTCTATAAAAGCATTCTCAATTCTAAAAGTTCTGATGAGTCTCTGGCAAATTTTGCAAAATGGGAACCAGGTCATGGCAAGTTCAAATTTCGTCATCCATGGGATCAATACCTCAAAATTGGTGCCCTTTCTCGCCAATGTGCATATCGAATGGAGGCTCTAAATGAACACCTCAATTCTAATACACAAGTATCACCAGAAATTCATGGGAGGATCCAAGAAATGTGCTCAGAAATGGGTTTGGAATCTAGCAAAGCTCTGAAGGAACTAGGAGTATCAATCAAATCAACAACTAGAGCAACTTCTGCAGATACCCATGTTGCAAATGCAAAAGTTGCAGTCAAGAGCCTCAAGTCATTCCTCCAATCAAGCTTGTTTAAAGAAACAGACCTCTTGTCACTTGTACCATCTGTGACAGTGGCTTCACTACTAATTGATATTGTTGACTGCACAGATAAAATAGCAGATTCAGTGAATGTTCTTGCCTCCCTAGCAGATTTTGATATTGAAGATACAGATAAATCTCCCAAAACATCACAATCTCCACACTCTGAATGTGAACTGGGTCCCAAAACTGATAACTCCCATGTAGTTATTCATGTTGAGGAGTTAGCTTTGTCTGAATGTGGAAATTCAAAATCTGATCAGCATAACATAGTTAGATAG 1434 0.3884 MASPNTDQEKAGVLGRVWEPLKALPKVLMKKVLSIYKMSKKIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLVAGALGVGAHYLASLSGKTGEPILIGVFVFVQAAIASFIRFFPKVKTRYDYGMLIFILTFSLISVSGFRDDEVLQMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHCSIAHKLETLGDFLEAFVHEYFEKSNKGDSKDNESFLEVYKSILNSKSSDESLANFAKWEPGHGKFKFRHPWDQYLKIGALSRQCAYRMEALNEHLNSNTQVSPEIHGRIQEMCSEMGLESSKALKELGVSIKSTTRATSADTHVANAKVAVKSLKSFLQSSLFKETDLLSLVPSVTVASLLIDIVDCTDKIADSVNVLASLADFDIEDTDKSPKTSQSPHSECELGPKTDNSHVVIHVEELALSECGNSKSDQHNIVR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01177 477 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 431 - -
Rops3g01177 477 Pfam Aluminium activated malate transporter 41 418 IPR020966 GO:0015743
Rops3g01177 477 MobiDBLite consensus disorder prediction 427 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01177 Rops-Chr3 16583283 16585898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01177 29 421 Miscellaneous Gene Families AT1G08440 58.586 1.56e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01177 K25841 - gmx:100816113 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00494 7 6306233 6309053 Rops3g01177 3 16583283 16585898 PCT