Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00479 ATGCTCATGCAGAAGCAGGGCATTGCCACTATTTTGGGCTCTAACTCTCTGCGACGGACTCTATCCGCTGACATGTCATCAAAGACATGGATTTCTCAAAATGAGTTATCTCCCATGAAAAAGACTGCTTCCTCTGAAGAACTCTCACATTCGAAAGTCATTGCTGATTCATTGTCCTCATCTGAAGGTGAAGATGACTATGAAGAAATGAAGGAGCTAGAAGCTGAAGCAGAAGCAGAACAAGAAAGACTCCAAATTTGGAGCTCAATTCAACAAGACAAGAAGGAGCAGAATGAGAAACCAGGGCAGTTTGATATGTGGAGTTCAATCTTATCCCATAAGGCGAATGATGAAACCTCCAAATTAACAACTACTCCTTATATTCACCCACTTGTGAGAAGGTCAAAAAGCTGTTTGGGTGAAAAGGGTCTCGAAATATGCACCGAGAGTCTTGGATCCGAAACTGGCTCAGATGGGTTCTCTTCTAACCCACCATCTGAGTCAGGGGATTCAGAGGAAAAGGAAGAAGAAGAGGAAGTGACAGTGCAGCAAGCACATGAGGAGGAGGAGTTGCAAGTTCCAAAATACAACTATGCTACCAGGAAGTCCTTGCCACGTTCTTTCCCTCCTCCACTCCCTTCACTCTCTCGTCAAAATGGTTCATCACTCCAGATGCGGTCCCACCGTGACAATGGAAGGTTGTTCCTACAAGCTGTGTCTGTTCCTTCACAGAACAACTTTTGTGCTCAACGCCAAGATGGTCGCCTTGTCCTTACTTTTGCTACTTATCCTCAAAAGGATGAAAACCATGTAGCTGAAGAAGAAGAAGAAGAAGAAGAGAACGATGATGTGAAAGAGTTAGAGGAGGAATTTGTGGGGTATGAGGAAGATGATGATGATGAAGCAGAGGAAGTTGAGACTGTGAGAAAGCAAACACAGATATTGTCTAGTGGGATTACAAGTGTTCATAGGAGGTTAGCATTAATGATGAATAAGCCAATTGGGTTAGTGAATAATAGTTCAAAATGGTCACAGAATTTCAACAAGGTGACCAAATTTAAGGATGTAAATGGGGTGCAACATAGTACACTGGCTCAGTCACTACCAAGGGTTCCATCATCACCAACCGTGGCATCTGCTTTCAATGCTTATGAATACTACTGGAGAACCAAGCCCACTACAAAAGCTGCACCTGTTCCTAACCCATTTACTACCCATCAACAAAATGAGGAACAACCATTGCTGGTTCTGAGAGGGAAGAATGGTGGTTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGGAGGTCTTTTCTCTTCTGGGAGTCCTATTGCATTGCTACCTGA 1350 0.4341 MLMQKQGIATILGSNSLRRTLSADMSSKTWISQNELSPMKKTASSEELSHSKVIADSLSSSEGEDDYEEMKELEAEAEAEQERLQIWSSIQQDKKEQNEKPGQFDMWSSILSHKANDETSKLTTTPYIHPLVRRSKSCLGEKGLEICTESLGSETGSDGFSSNPPSESGDSEEKEEEEEVTVQQAHEEEELQVPKYNYATRKSLPRSFPPPLPSLSRQNGSSLQMRSHRDNGRLFLQAVSVPSQNNFCAQRQDGRLVLTFATYPQKDENHVAEEEEEEEENDDVKELEEEFVGYEEDDDDEAEEVETVRKQTQILSSGITSVHRRLALMMNKPIGLVNNSSKWSQNFNKVTKFKDVNGVQHSTLAQSLPRVPSSPTVASAFNAYEYYWRTKPTTKAAPVPNPFTTHQQNEEQPLLVLRGKNGGYLVHNLKSCKDSRRSFLFWESYCIAT* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00479 449 Pfam Fantastic Four meristem regulator 207 260 IPR046431 -
Rops7g00479 449 MobiDBLite consensus disorder prediction 61 75 - -
Rops7g00479 449 MobiDBLite consensus disorder prediction 35 58 - -
Rops7g00479 449 Coils Coil 60 90 - -
Rops7g00479 449 Coils Coil 270 304 - -
Rops7g00479 449 MobiDBLite consensus disorder prediction 150 226 - -
Rops7g00479 449 MobiDBLite consensus disorder prediction 35 80 - -
Rops7g00479 449 MobiDBLite consensus disorder prediction 150 167 - -
Rops7g00479 449 MobiDBLite consensus disorder prediction 179 195 - -
Rops7g00479 449 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 15 449 IPR021410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00479 Rops-Chr7 6005686 6007524 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00479 - - aprc:113855465 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00479 7 6005686 6007524 Rops7g00479 7 6005686 6007524 ECH
Rops7g00479 7 6005686 6007524 Rops3g01186 3 16788269 16797854 PCT