Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01186 ATGGAGCCTAATCAAATACCATCGCTGCCAACGCTGCACACTTTTTCTAATCCTGTTTCCTTCAAATTGGATGAAGGAAATTTTCTTCCATGGAAACAGCAAGCCATGGCTACCATCAAAGGATACAATCTGGTTCATTTTCTCACTGGAGATAGCATTCCTTCAAAGTTCAGATCTGAAGCTGAGCAAATTGCTGGTTCAATCAATCCTGAGTTTTCTTTATGGCTTCAACAGGATCAATTGCTGATGAGTTGGCTTCTTGCTTCTATGTCAGAAACATTGCATAATCGGATGATTGGATGTGATTCTTCAAAGCAAATCTGGCAGAAACTCGAAATTTTCTTTGCCTCACAGACAAGAGCCAAGGTAAAACAGTTTAAAATTCAGTTGAGGAACATAAAGAAAGGAAATGCTTCTATCAGTAGTTATTTGTTGCATATAAAGAAGCTTGTTGATTCATTGTGTGCTGTTGGAAATCCAATCTCAGTAGAAGAACACATTGAGGCAATTTTTGATGGTCTAGGAGATGAATATGATCCATTTATAACCTCTGTGACCTCTAGATCAGATCCATACTGTGTTGATGAAATTGAAGCTTTGCTTATGGCACAAGAAGATCGTTTGGAAAAGCACAAGCTTAACACTATTCAAGCCAACATGTCTCAGTTAAGCTTTGGAAGAAACTCAGGAAGAGGCTTCAGAGGTAGAGGAAGATACAATAATCCAAATCAATTTTCTGGTAGAGGCAGATTTCACAGAGGTGATAATTTTCACAGAGGTGCAGGCAGATGTGGTCAGGCACAACATCAATTCACTCAAGGTGCAGCAGGATCTTCTTCAAAGCAGGCTTATTTCACTACCACTGAGTCTGGACCTTCCTCATTCACACCAGGATTTTTTGAAACATCATCAATGAAGACTGATCCAGCATGAGACCTCTGTTGGATTGCGTTGCTAATTCAGCCAAGTGATTTTCCTTCGTCTTTGGGTTTATTGGAGATGTCAGCTACTATGACCATGAAGTTACAACAACAATCCCAAGGCTTATTATTATCTTCTTCAATGAAGATAGAGGAGGAGACTATGCTGACTCAGAAGCAGGGCATAGTCACTATTTTAGGCTGTGAAAGTGAGAAAAACACAGCTTCTTCTTCCTCTTTGAGAAGAACTCTATCAGCAGACATGTCATCAAAGAAATGGGTTTCTCAAAATCAATCTTTCTCAACCATGAAAAAGATTGCTTCATCTGAAGAACTCTTGCAGCACACCAAAACCATTGCTGACTCATTCTCCTCATCTGAAGGAGAAGATGACTATGAAGAAACCAAGGAGCTTGATGCTGAAGCTGAGAGAGAAAGGCTTGAGATTTGGAGCTCAATCCAACGAAACAAAAAGGAGGAGCAAGAAAAGGCAGGACCATTTGATACTTGGGGCTCAATCATGTCCATTAAGTCCAAAGATGAAATCTCAAAATCACTTCCAGTTACTCCTTATATTCACCCTCTTGTGAAAAGGTCAAAAAGCTCTTTGAGTGAGAAGAGCCTTGAAATCTGCACTGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGTTGTTCTCATCTGACCCTTCTTCTGAGACAGGGGATGCAGATGAAGAAGAACAAGAAGAGAAAGAGCAACAACAAGAACAAGACCAAGAACAAGAAGAGTTGTTTCAAGTGCCAAGGTACAATTATACTGCTGCAACTACTAAGAAGTCTTCTTCACCACGCTCTTTCCCTCCACCACTTCCATCACTCTCACGCCAGACGGGACCTTCCCTTCACATGAGGCCTCGCCGTGACAACGGAAGGTTGGTCCTTGAAGCTGTGTCACTTCCTTCGCTGAACAACTTCTGTGTTCAACGCCAAGATGGTAGACTTGTTCTCACTTTTTCCAATCAAAAGAATGATGCTGAGAAGGAAGAAGAGAAAGAGAATGATCATGTGGAGGAGTTGGAGGAAGAGTTTGAGGAAGATTATGATATTGATCAAGAGGATGAGGATGAGGATGAGGTTGAGGATGGTGAAACAGAGGAAGAAGAGGAAGTTGGGGACTATGAAAATGACGTTAGGGAAGTAGTTGTAGAGAGTGTGAAAGAGAAAGCGCCGTTATTGTCTAGTGGGATAACTAGTAGTGTTCATAGATTAGCATTGATGGTGAATAATAAGCCAACTGGGCTAGTGAATAAGAATCCAAAGTGGTCTAAGTTCAATCAAGTGACCGATTTTGAGGACATTAATGTTGTGAAGGAGGCTAATCATCAAATGGCACAATCATTGCCACCAAGGCCAAGGGTGGCTAGGCTGATTCCATCAGCTCAAGCCTCAGCAGCAGCTGCTTCTTTCAATTTCAATGCTTATGAACACTATTGGAGGACCAAGACCACAGCAAAAGATACCAATAATCCACTTGTCCATCATCAACAGAACAACAACAACTCACCCTTGAAGAACAACAATAGCAACAAGCTCATTGTCTCTGGGGACATGAACAAGGTCTCAAATGAGCAACAACAATTGCTGGTTCTAAGAGGGAAGAATGGTGATTACTTGATTCACAATTTGAAGAGTTGCAAGGATTCTAGAAGGATTCTTTCATGTTTTAAGTTAAATCCTTTTGAGTATTTGAACCTGCCATTTGATGCATCACCTGATGATGTTTTAACTGTTCTGCTGGCCTCTTCTAACATACTTTTGATAACCTTTTTGTGGTTGTCATTGATGGTTCATCCCGACAAATGCAAGCATCCACAAGCAAAGGAGGCTTTTGGAGCACTAGCAAAAGCCCAACAATTATTACTTGATCAAAATGAAAGAGATTACCTTCTTAGCCAAGTTAATTCAGCAAAAGATTAG 2877 0.4098 MEPNQIPSLPTLHTFSNPVSFKLDEGNFLPWKQQAMATIKGYNLVHFLTGDSIPSKFRSEAEQIAGSINPEFSLWLQQDQLLMSWLLASMSETLHNRMIGCDSSKQIWQKLEIFFASQTRAKVKQFKIQLRNIKKGNASISSYLLHIKKLVDSLCAVGNPISVEEHIEAIFDGLGDEYDPFITSVTSRSDPYCVDEIEALLMAQEDRLEKHKLNTIQANMSQLSFGRNSGRGFRGRGRYNNPNQFSGRGRFHRGDNFHRGAGRCGQAQHQFTQGAAGSSSKQAYFTTTESGPSSFTPGFFETSSMKTDPA*DLCWIALLIQPSDFPSSLGLLEMSATMTMKLQQQSQGLLLSSSMKIEEETMLTQKQGIVTILGCESEKNTASSSSLRRTLSADMSSKKWVSQNQSFSTMKKIASSEELLQHTKTIADSFSSSEGEDDYEETKELDAEAERERLEIWSSIQRNKKEEQEKAGPFDTWGSIMSIKSKDEISKSLPVTPYIHPLVKRSKSSLSEKSLEICTESLGSETGSDGLFSSDPSSETGDADEEEQEEKEQQQEQDQEQEELFQVPRYNYTAATTKKSSSPRSFPPPLPSLSRQTGPSLHMRPRRDNGRLVLEAVSLPSLNNFCVQRQDGRLVLTFSNQKNDAEKEEEKENDHVEELEEEFEEDYDIDQEDEDEDEVEDGETEEEEEVGDYENDVREVVVESVKEKAPLLSSGITSSVHRLALMVNNKPTGLVNKNPKWSKFNQVTDFEDINVVKEANHQMAQSLPPRPRVARLIPSAQASAAAASFNFNAYEHYWRTKTTAKDTNNPLVHHQQNNNNSPLKNNNSNKLIVSGDMNKVSNEQQQLLVLRGKNGDYLIHNLKSCKDSRRILSCFKLNPFEYLNLPFDASPDDVLTVLLASSNILLITFLWLSLMVHPDKCKHPQAKEAFGALAKAQQLLLDQNERDYLLSQVNSAKD* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01186 957 MobiDBLite consensus disorder prediction 538 558 - -
Rops3g01186 957 MobiDBLite consensus disorder prediction 806 830 - -
Rops3g01186 957 SUPERFAMILY Chaperone J-domain 869 946 IPR036869 -
Rops3g01186 957 Coils Coil 194 214 - -
Rops3g01186 957 MobiDBLite consensus disorder prediction 652 693 - -
Rops3g01186 957 MobiDBLite consensus disorder prediction 559 582 - -
Rops3g01186 957 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 383 873 IPR021410 -
Rops3g01186 957 MobiDBLite consensus disorder prediction 511 537 - -
Rops3g01186 957 MobiDBLite consensus disorder prediction 426 446 - -
Rops3g01186 957 CDD DnaJ 877 941 IPR001623 -
Rops3g01186 957 MobiDBLite consensus disorder prediction 639 695 - -
Rops3g01186 957 Coils Coil 541 563 - -
Rops3g01186 957 Coils Coil 641 665 - -
Rops3g01186 957 MobiDBLite consensus disorder prediction 231 250 - -
Rops3g01186 957 Gene3D DnaJ domain 859 947 IPR036869 -
Rops3g01186 957 MobiDBLite consensus disorder prediction 489 606 - -
Rops3g01186 957 Pfam Fantastic Four meristem regulator 584 637 IPR046431 -
Rops3g01186 957 Pfam gag-polypeptide of LTR copia-type 75 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01186 Rops-Chr3 16788269 16797854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01186 - - aprc:113858041 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00479 7 6005686 6007524 Rops3g01186 3 16788269 16797854 PCT