Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00460 ATGGGTTGCCGCGTCACCATCTTTCTTCTTCTTTTCCTCGTCACCGGTTTCACGCTAACATTATCGGAGAATCCGAACCCAAAGTTGAGGGTGTCGTCTTCTTCATCACCGACGGGTCAGATTAACTCAAACTCAGTTCTAGTGGCTCTTCTTGACTCGCATTACACAGAACTCGCTGAGTTAGTGGAAAAGGCCATGCTTTTGCAGAAACTAGAAGAAACGGTCGCTACCCACAACATCACAATCTTCGCACCAAGAAACGAAGCCCTTGAACGCAATCTCGACCCAGATTTCAAGCGCTTTCTTCTAGAACCCGGTAACCTCAACTCTCTCCAAACCCTTCTATTATTCCATGTCATCCCCACCCGAATCGGATCCGAAAACCCACCCGGGTCAACCCGACACGTTACGCTCTCTAACCATAACATCCACCTCGTGAGTAACGTCACCGGAGAATGGACCGTAGACCGGGCTAAGGTTACCCACCCGGATGTTATAACCCGACCCGACGGCGTAATCCACGGGATAGAGCGCCTTCTTGTTCCTCGCTCCGTTGAGGATGACTTCAATCGCCGGCGGAGTCTCCGTTCCATCACGGCCGTGAAACCTGAGGGTGCGCCGGAGGTGGACCCGAGGACTCACAGGTTGAAGAAACCACCCCCGACGGCGAAACCAGGTTCACCGCCGGCGCTTCCGATCTACGATGCCTTAGCTCCAGGACCTGCCCTGGCTCCGGCACCGGCGCCGGGACCTGGTGGGAAGCACCACCACTTCAACGGCGAGGCACAGGTGAAGGATTTCATACAAACTCTTCTCCATTACGGTGGGTACAACGAAATGGCTGATATTCTGGTGAACCTAACGTCGTTAGCGACCGAAATGGGTCGTTTGGTCTCAGAGGGTTACGTTCTCACCGTTCTTGCTCCCAACGACGAAGCCATGGCGAAGTTAACAACGGACCAGTTGAGTGAACCGGGTGCACCGGAACAGATAATGTACTACCATCTAATACCGGAGTATCAAACCGAAGAGAGTATGTACAATGCGGTTAGAAGGTTCGGGAAGGTTCGGTACGATACACTTCGGTTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGGTCCGTTAAATTCGGGCAGGGAGACGGGTCGGCTTATTTGTTCGACCCGGATATCTATACGGATGGGCGGATCTCGGTTCAGGGGATTGATGGTGTTTTGTTTCCACTAGAGGAAGAGTCGGAGCGGGTTAAACCCGTTACACGGACGGGTCAACCCTCTAAAGTCGTTGTCAAGCACAGAAGAGGAAAATTGCTAGAAGCAGCATGCTGGATGCTTGGAACCTTCGGACAACATTCTAGATTCGCCTCTTGTCAATGA 1380 0.5275 MGCRVTIFLLLFLVTGFTLTLSENPNPKLRVSSSSSPTGQINSNSVLVALLDSHYTELAELVEKAMLLQKLEETVATHNITIFAPRNEALERNLDPDFKRFLLEPGNLNSLQTLLLFHVIPTRIGSENPPGSTRHVTLSNHNIHLVSNVTGEWTVDRAKVTHPDVITRPDGVIHGIERLLVPRSVEDDFNRRRSLRSITAVKPEGAPEVDPRTHRLKKPPPTAKPGSPPALPIYDALAPGPALAPAPAPGPGGKHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEESERVKPVTRTGQPSKVVVKHRRGKLLEAACWMLGTFGQHSRFASCQ* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00460 459 Gene3D FAS1 domain 254 409 IPR036378 -
Rops7g00460 459 MobiDBLite consensus disorder prediction 199 258 - -
Rops7g00460 459 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Rops7g00460 459 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Rops7g00460 459 SUPERFAMILY FAS1 domain 45 183 IPR036378 -
Rops7g00460 459 ProSiteProfiles FAS1/BIgH3 domain profile. 42 180 IPR000782 -
Rops7g00460 459 FunFam Fasciclin-like arabinogalactan protein 16 259 410 - -
Rops7g00460 459 Gene3D FAS1 domain 46 183 IPR036378 -
Rops7g00460 459 SMART fasc_3 81 183 IPR000782 -
Rops7g00460 459 SMART fasc_3 305 410 IPR000782 -
Rops7g00460 459 MobiDBLite consensus disorder prediction 221 235 - -
Rops7g00460 459 Pfam Fasciclin domain 289 409 IPR000782 -
Rops7g00460 459 Pfam Fasciclin domain 54 182 IPR000782 -
Rops7g00460 459 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 10 453 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00460 Rops-Chr7 5769604 5772935 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00460 - - gmx:100815434 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00460 7 5769604 5772935 Rops3g01206 3 17092951 17097653 PCT