Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01206 ATGGCCATGGATTGTGGCATCTATGGCATCACCAAGCTCCACATGTTCTGCACTTTCCTTCTTCTCTTAATCTCATCACCATTTTCAACGGGTCAGGGTCAGATTAACTCAAACTCCATTCTGGTGGCTCTGTTGGACTCACATTACACTGAGATAGCTGAGCTTGTGGAAAAGGCTATGCTTCTGCAAACTCTAGAAGACACGGTGGGAACACACAACATCACCATTTTCGCACCAAAAAACGAAGCTTTAGAGCGAGATCTCGACCCGAATTTCAAGAGCTTCTTATTGGAGCCCCGAAACCTCAAGTCCCTTCAGACCCTCTTGATGTCCCACATCATCCCCACCCGAATCACAGGATCCGAATCCTTAAACGGGTCGACCAGACACAAAACTCTCGCCCCACAACACCACCTCACTTTACAACAATGGACCGTCGACGGTGCCCGGATTCTCCATCTGGATTCATTGACCCGACCCGACGGAGTAATCCACGGAATCGAACGCCTCCTCATCCCTCGCTCCGTCCAAGATGACTTCAACCGTCGCCGGAGCCTCACCTCCATCGCCGCCGTGAAACCCGAGGGAGCACCCGAAGTTGACCCGAGAACCCACCGTCTGAAAAAACCAGCCCCGCCGCAGAAGCCCGGGTCCCCACCGGCGCTACCAATTTACGACGCAATGGCCCCGGGCCCTTCCCTGGCTCCGGCGCCGGCACCAGGACCCGGTGGACCCCACCACCACTTCAACGGCGAGGCTCAGGTGAAGGACTTTATCCAAACACTAATCCATTACGGTGGGTACAACGAGATGGCAGACATTCTCGTTAACCTCACTTCATTAGCTACGGAAATGGGTCGTTTGGTTTCTGAAGGTTACGTTTTAACAGTTCTAGCTCCAAACGATGAAGCCATGGCTAAGTTAACCACTGACCAGTTGAGTGAACCTGGTGCACCTGAACAGATCATGTATTACCATCTCATCCCTGAGTATCAAACTGAAGAGAGCATGTACAATGCGGTTCGAAGATTCGGTAAGGTTAAATATGATACACTTCGGTTACCACATAAGGTTCTGGCACAAGAAGCTGATGGGTCGGTAAAATTCGGGCATGGTGATGGGTCGGCTTATTTGTTTGACCCGGATATTTATACTGATGGTCGGATCTCAGTGCAAGGGATTGATGGGGTGTTGTTTCCGCCGCAAGAAGAGGAGGAGAAGAATTTGACCCGAACCCGAATGGGTCAACCCGCTAAGGTTGTGGTTAAGCAGAGAAGAGGAAAGTTGATGGAAGCAGCATGCTGGATGCTTGGAACCATTGGACAGCATTCTAGATTCACCTCTTGTCAATAA 1353 0.5092 MAMDCGIYGITKLHMFCTFLLLLISSPFSTGQGQINSNSILVALLDSHYTEIAELVEKAMLLQTLEDTVGTHNITIFAPKNEALERDLDPNFKSFLLEPRNLKSLQTLLMSHIIPTRITGSESLNGSTRHKTLAPQHHLTLQQWTVDGARILHLDSLTRPDGVIHGIERLLIPRSVQDDFNRRRSLTSIAAVKPEGAPEVDPRTHRLKKPAPPQKPGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLIHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVKYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPQEEEEKNLTRTRMGQPAKVVVKQRRGKLMEAACWMLGTIGQHSRFTSCQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01206 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 28 447 IPR044654 -
Rops3g01206 450 ProSiteProfiles FAS1/BIgH3 domain profile. 255 383 IPR000782 -
Rops3g01206 450 SMART fasc_3 296 401 IPR000782 -
Rops3g01206 450 SMART fasc_3 75 174 IPR000782 -
Rops3g01206 450 MobiDBLite consensus disorder prediction 212 226 - -
Rops3g01206 450 SUPERFAMILY FAS1 domain 38 174 IPR036378 -
Rops3g01206 450 Gene3D FAS1 domain 41 174 IPR036378 -
Rops3g01206 450 ProSiteProfiles FAS1/BIgH3 domain profile. 36 171 IPR000782 -
Rops3g01206 450 MobiDBLite consensus disorder prediction 193 250 - -
Rops3g01206 450 Pfam Fasciclin domain 280 400 IPR000782 -
Rops3g01206 450 Pfam Fasciclin domain 48 173 IPR000782 -
Rops3g01206 450 FunFam Fasciclin-like arabinogalactan protein 16 250 401 - -
Rops3g01206 450 SUPERFAMILY FAS1 domain 234 401 IPR036378 -
Rops3g01206 450 Gene3D FAS1 domain 274 401 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01206 Rops-Chr3 17092951 17097653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01206 - - gmx:100790599 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00460 7 5769604 5772935 Rops3g01206 3 17092951 17097653 PCT