Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00391 ATGAAGAACGATGACAACAACAGGGGACAACATCAGAACAACAAAGACACTACTACTGCCATTGGAATTCTGGATTCCCGATTCAACCAGACCCTCAGAAGTGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGTAAAATATTATTGAGCCAGAGGGTAGATCCAATAGATAACTCAAACTTATCATCGCCAACTTATAAAAGGAGCTCCTCATACGGTGATGCTGGCTCAAGTGATCACACACCTGAGACAGTAGAGGAGGAAGTTCGCAGTACAAGCAAACCATTTGGTAACTCAAATGAGAATAAGTTAAAAATATCAACCTCCCATGCAGACAGCCCATCTGAAGAAGTCCGGAAATCTTCCATGGGTGCTAGATCTACAGATTCTGCAAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGACAATGGTTATACTAGATAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATACGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGCCTTGAATATCTTGATTGTGTTTCTCAGTATTATGACATTCCTGATACAGATCGCTCAGATGATGAGATCAACATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTTTATTCTTCCAGCAACAGCAAGTTCAGAAATCACTGGAGCGTATTCTTTACACATGGGCCATTCGGCATCCTGCGAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTCGTTGTTTTCCTATCAGAATACTTAGAAGGGAGCATAGATAATTGGTCAATGTCTGATTTATCCCCAGATCAAATCTCTAATGTAGAGGCTGACTGCTATTGGTGCTTGTCAAAGTTGCTTGATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATTCAAAGGCTTGTTTTCAAGTTGAAGGAATTGGTCAGGAGGATTGATGATCCTGTTTCAAGCCATATGGAGAATCAGGGACTGGAATTTCTTCAATTTGCTTTCCGTTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCATCTCGTCACACGTCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTAACGTGGTCAGACAAACTCCAGAAGCTTGATTTCCAAGAGTTGGTAATGTTTCTTCAACACCTTCCAACTCAGAACTGGACTCACCAGGAGCTAGAGATGGTACTTTCCCGGGCATTTATGTGGCACTCCATGTTCAACAACTCTCCGAGCCATTTAGCTACCTGA 1368 0.4269 MKNDDNNRGQHQNNKDTTTAIGILDSRFNQTLRSVQGLLKGRSIPGKILLSQRVDPIDNSNLSSPTYKRSSSYGDAGSSDHTPETVEEEVRSTSKPFGNSNENKLKISTSHADSPSEEVRKSSMGARSTDSARVMKFTKVLSGTMVILDKLRELAWSGVPDYTRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTDRSDDEINMLRQIAVDCPRTVPDVLFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSPDQISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSSHMENQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00391 455 FunFam TBC domain containing protein 188 319 - -
Rops7g00391 455 MobiDBLite consensus disorder prediction 56 79 - -
Rops7g00391 455 MobiDBLite consensus disorder prediction 56 128 - -
Rops7g00391 455 MobiDBLite consensus disorder prediction 92 110 - -
Rops7g00391 455 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g00391 455 Pfam Rab-GTPase-TBC domain 163 406 IPR000195 -
Rops7g00391 455 Gene3D - 320 455 - -
Rops7g00391 455 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 112 428 - -
Rops7g00391 455 ProSiteProfiles TBC/rab GAP domain profile. 158 385 IPR000195 -
Rops7g00391 455 SMART tbc_4 155 411 IPR000195 -
Rops7g00391 455 FunFam TBC1 domain family member 132 184 - -
Rops7g00391 455 FunFam TBC domain containing protein 320 455 - -
Rops7g00391 455 Gene3D - 135 186 - -
Rops7g00391 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 135 345 IPR035969 -
Rops7g00391 455 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 195 319 - -
Rops7g00391 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 321 443 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00391 Rops-Chr7 5018055 5023873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00391 K20360 - gmx:100785695 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00391 7 5018055 5023873 Rops7g00391 7 5018055 5023873 ECH
Rops7g00391 7 5018055 5023873 Rops3g00637 3 7855995 7861061 PCT