Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00637 ATGCCTGGTAAAATATTATTGAGCCTGAGATCAGACCCACCAGATAACTTTAACTCAAAACCATATTACAAAAGGAGCTTCTCATACAATGATGCTGGCACAAGCAATCACTCTCCTGGGGCAGTAGAGGAGGTGGAATTTCAGAGTAAAAGCAAACCAATTAGCGTTGCCAATGTTAGTAAGTTAAAAATATCAACCTCATTTTGTGTGAGAGAGAGCCCATCTGAAGAATTCCGCAAGTCTACCATGGGTGCTAGAGCTACGAATTCTGCAAGAGTTATCAAGTTCACTAAGGTGCTTTCTGGGAAAGTGGTTATATTAGACAAGTTGCGTGAATTAGCTTGGAGTGGCATTCCAGATTATATGCGTCCTAAGGTGTGGAGACTTCTCTTGGGATATGAACCACCTAATTCAGATAGAAGGGTGGGAGTTTTAAGAAGGAAACGTCTAGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGACACTGAACGTTCCGATGATGAGGTCAACATGCTTCGGCAGATTGCTCTTGATTGTCCAAGAACAGTCTCTGACGTTCCTTTCTTCCAGCAACAGCAAGTTCAGAAATCATTGGAGCGTATTCTTTATACCTGCTTGGCTAAGAAAGTCACACAGCATGACTTCCTCTGTATTGGATATCAACTGTATAGCTGCAGTTTTTATCCATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTATGCCATTTTTAGTTGTTTTCTTATCAGAGTACTTAGAAGGGGGTGTAGACAATTGGTCAATGTCTGATTTATGTTCAGATAAAATTTCAAATATAGAAGCTGACTGCTACTGGTGCTTGATAAAGTTGCTTGATGGTATGCAAGACCATTACACATTTGCTCAACCTGGAATTCAGAGGCTTGTTTTTAAATTGAAGGAATTGGTCACGAGGATCAATGAGCCTGTTTCACGACATATGGAGGATCAGGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATTCGTGAGATACCCTTCCATCTTGCCACACGACTTTGGGACACATATCTAGCCGAAGGAGATGCCTTACCAGACTTCCTAGTGTATATATTTGCCAGTTTCCTTCTAACGTGGTCAGACAAGCTCCAGAGGCTTGAATTCCAAGAATTGGTGACGTTCCTTCAACACCTTCCAACTCAGAACTGGACTCACCAGGACCTCGAGATGGTGCTTTCCCGGGCATTTATGTGGCACAGCATGTTCAACAACTCTCCAAGCCATTTAGCTAGCTGA 1320 0.4227 MPGKILLSLRSDPPDNFNSKPYYKRSFSYNDAGTSNHSPGAVEEVEFQSKSKPISVANVSKLKISTSFCVRESPSEEFRKSTMGARATNSARVIKFTKVLSGKVVILDKLRELAWSGIPDYMRPKVWRLLLGYEPPNSDRRVGVLRRKRLEYLDCVSQYYDIPDTERSDDEVNMLRQIALDCPRTVSDVPFFQQQQVQKSLERILYTCLAKKVTQHDFLCIGYQLYSCSFYPWAIRHPASGYVQGINDLVMPFLVVFLSEYLEGGVDNWSMSDLCSDKISNIEADCYWCLIKLLDGMQDHYTFAQPGIQRLVFKLKELVTRINEPVSRHMEDQGLEFLQFAFRWFNCLLIREIPFHLATRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQRLEFQELVTFLQHLPTQNWTHQDLEMVLSRAFMWHSMFNNSPSHLAS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00637 439 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 305 427 IPR035969 -
Rops3g00637 439 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 232 329 IPR035969 -
Rops3g00637 439 FunFam TBC1 domain family member 91 143 - -
Rops3g00637 439 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 154 223 - -
Rops3g00637 439 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 230 303 - -
Rops3g00637 439 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 97 207 IPR035969 -
Rops3g00637 439 Gene3D - 304 439 - -
Rops3g00637 439 ProSiteProfiles TBC/rab GAP domain profile. 117 369 IPR000195 -
Rops3g00637 439 Gene3D - 94 142 - -
Rops3g00637 439 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 89 410 - -
Rops3g00637 439 Pfam Rab-GTPase-TBC domain 233 390 IPR000195 -
Rops3g00637 439 Pfam Rab-GTPase-TBC domain 121 207 IPR000195 -
Rops3g00637 439 FunFam TBC domain containing protein 304 439 - -
Rops3g00637 439 SMART tbc_4 114 395 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00637 Rops-Chr3 7855995 7861061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00637 K20360 - gmx:100819281 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00391 7 5018055 5023873 Rops3g00637 3 7855995 7861061 PCT