Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00302 ATGGATTTCTTCAAATGGGTAAACTTGTTCATCATTTTTCATTGCTTTGCTGCAATACCCGTCTTCTCAGATTCCTCCTTCAGCTCAAATGAACACTTCACCACCAAGTTTCTCGATTCAGCCGAGGATCCTCGGGTTTTTGATTGGATGGTGGGTATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGTTATGAGGAATTTGAGACAAGTGAGCTGATAAGAGGGGAATTGGACAAACTGGGCATCCCATATAAACACCCAGTTGCAGTCACTGGTGTTATTGGCTTCATAGGGACTGGAAGCCCTCCTTTTGTTGCACTTAGAGCTGACATGGATGCTCTTCTTATACAGGAAATGGTGGAGTGGGAGCATAAGAGTAAAGTACCAGGAAAGATGCATGCATGCGGTCATGATGCCCATGTTGCTATGCTTCTCGGTGCTGCAAAGATCCTCAAGGAGCATGAAAAAGAGATCCGAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAAGAAGGAGGTGGAGGGGCTAAGAAAATATTAGATGCTGGAGCCTTAGAAAATGTCTCTGCTATATTCGGATTGCATGTCTCACCTGACGTACCTATAGGTGAAGTGGCCTCTAGGTCTGGTCCTCTGTTTGCTGGAAGCGGCTTCTTTGAAGCAATAATAAGTGGAAGGGGAGGCCATGCAGCTATTCCTCAGCATTCGATAGACCCCATATTGGCAGCTTCCAATGTGATTGTTAGCTTACAACATATTGTTTCTCGTGAGGCTGATCCTCTGGACTCCCAGGTTGTGACTGTTGGAAAATTTCAAGGAGGTGGTGCATTCAATGTTATTCCTGACTCTGTCACAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGTTTCATGCAACTGAGACATCGGATTGAGCAGGTTATCACCGGGCAGGCTGCTGTGCAGAGGTGCAATGCAACGGTCAGCTTCCTTGATGACGAGAAACCTTACTTCCCTCCAACTGTAAACAATGCTGACTTGCATGAGTATTTTCAAAGTGTTGCTGGGAGTTTGCTTGGCGTCAATAAAGTCAAGGACATGCAACCGTTGATGGGATCTGAGGACTTTGCATTCTATCAACAGGTTTTTCCTGGATACTTCTTTGTCCTTGGCATGGAGAATGCCTCTGTTGAACGTCTTGGATCACCACATTCTCCCTATTTCAAAATCAATGAAGATGCACTTCCTTACGGAGCTGCACTTCATGCCTCATTAGCTACTGGGTATCTTCTCAAACTTCATCATCAGGACGTACCAGTAGTAGAGGGGAAATATCATGATGAATTATAA 1335 0.4494 MDFFKWVNLFIIFHCFAAIPVFSDSSFSSNEHFTTKFLDSAEDPRVFDWMVGIRRKIHENPELGYEEFETSELIRGELDKLGIPYKHPVAVTGVIGFIGTGSPPFVALRADMDALLIQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKEIRGTVVLVFQPAEEGGGGAKKILDAGALENVSAIFGLHVSPDVPIGEVASRSGPLFAGSGFFEAIISGRGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRHRIEQVITGQAAVQRCNATVSFLDDEKPYFPPTVNNADLHEYFQSVAGSLLGVNKVKDMQPLMGSEDFAFYQQVFPGYFFVLGMENASVERLGSPHSPYFKINEDALPYGAALHASLATGYLLKLHHQDVPVVEGKYHDEL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00302 444 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 334 IPR036264 -
Rops7g00302 444 Gene3D - 215 333 - -
Rops7g00302 444 PANTHER PEPTIDASE M20 FAMILY MEMBER 24 431 IPR017439 GO:0016787
Rops7g00302 444 NCBIfam amidohydrolase 50 412 IPR017439 GO:0016787
Rops7g00302 444 SUPERFAMILY Zn-dependent exopeptidases 46 425 - -
Rops7g00302 444 Gene3D Zn peptidases 50 410 - -
Rops7g00302 444 Pfam Peptidase family M20/M25/M40 107 421 IPR002933 GO:0016787
Rops7g00302 444 FunFam N-acetyldiaminopimelate deacetylase 215 333 - -
Rops7g00302 444 CDD M20_IAA_Hyd 50 425 IPR044757 GO:0009850|GO:0016787
Rops7g00302 444 PIRSF Amidohydrol_AmhX 36 428 IPR017439 GO:0016787
Rops7g00302 444 Pfam Peptidase dimerisation domain 216 313 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00302 Rops-Chr7 3835461 3839415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00302 K21604 - gmx:100794121 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00302 7 3835461 3839415 Rops4g02055 4 46879896 46880189 PCT