Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02055 ATGTGTTTCTTCAAATGCTTCCCCTTGTTCTTCATCATTTTCCATGTCTTTGCTGCAACACCCATCTTCTCCTTAACAGTTTCTTCCTCCACCCCGAACCAGTTTATCACCAACTTTCTTGACACTGCCAAGGATCCTGAGGTTTTTGATTGGATGGTCAAAATCAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAAGAATTTGAGACCAGTGAACTGATAAGATCAGAATTGGATAAATCTCTTATAGACACCCAGTTGCAGTCACTGGTGTTATTGGCTTCATAG 294 0.4048 MCFFKCFPLFFIIFHVFAATPIFSLTVSSSTPNQFITNFLDTAKDPEVFDWMVKIRRKIHENPELGYEEFETSELIRSELDKSLIDTQLQSLVLLAS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02055 97 SUPERFAMILY Zn-dependent exopeptidases 47 83 - -
Rops4g02055 97 PANTHER PEPTIDASE M20 FAMILY MEMBER 28 88 IPR017439 GO:0016787
Rops4g02055 97 Gene3D Zn peptidases 25 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02055 Rops-Chr4 46879896 46880189 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02055 K21604 - lja:Lj3g3v2719840.1 116.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02055 4 46879896 46880189 Rops4g02055 4 46879896 46880189 ECH
Rops7g00302 7 3835461 3839415 Rops4g02055 4 46879896 46880189 PCT