Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00283 ATGTACAGAGCTGCAGCTTCACGTCTGACCCTTCTCAAGGGCAATGGGAGAACCTTGGGAGCCACCAGGTTTGCTACCTCAAGTGCTGTAGCTACAAGGCCTTCTTCAGGAAGTTTATTCAGCTGGCTTACTGGTGAAACTTCCAGTCCTCTTCCTTCTCTGGACGTACCACTTGGAGGGGTTGCCCTCCCAGCTCCACTCCCAGATTATGTTGAACCAAGCAAAACCAAGATCACAACTCTCTCTAATGGTCTCAAAATAGCATCGGAGACCTCAACAAATCCGGCTGCTTCAATAGGGTTGTATCTTGACTGTGGTTCCCTCTATGAGACACCATTGTCAAGTGGGGCATCACACTTGCTGGAGAAAATGGCTTTCAAGAGCACCACAAACCGAAGTCATTTTCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTACACATTTGATGCTCTAAAAACCTATGTTCCTCAAATGATTGAATTGCTAGTTGACTGTGTGAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGGTTCAAAAGGTGAAAGCAGAGCTTGGAGAGCTATCAAACAATCCTCAGGGATTACTTTTGGAGGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTAATCCACTTTTAGCTTCTGAATCAGCACTGAACAGATTAAATGGCTCCTTTTTAGAGGAATTTGTTGCTGAGAATTATACTGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTTTATCTGTTGCTGAGCCACTTCTCTCTGATCTACCAAGTGCTCCCCGTCCTGAAGAACCAAAATCTATCTATGTTGGGGGTGATTTTCGTCGTCAAGGTGAATCAGGGGATACTCATGTAGCTATTGCTTTTGAAGTGCCTGGTGGCTGGCAGAAAGAGAAAGATGCTGTTATTTTGACCGTTATACAGATACTTATGGGAGGAGGTGGGTCATTCTCTGCAGGGGGACCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTCTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTATTTGGAATATATGCAAGCACAAGCTCCGATTTTGTGGCAAAAGCTGTGGATGTAGCAGCCAAAGAATTGATAGCAATTGCATCACCGGGACAAGTTTCACAGGTACAGCTTAACCGTGCCAAAGAATCCACAAAATCCGCAGTTCTAATGAATTTGGAATCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTATGGAGAAAGGAAGCCTGTGGAGCAGTTCTTGAAGGCAGTTGATGAAATCACTTTGAATGATATAACTAAAATTTCTCAGAAGATTATTTCCTCACCTCTCACTATGGCATCCTATGGAGATGTTATCAATGTGCCCAGTTATGAATCCGTTAGCAGCAAGTTCCATGCAAAATGA 1518 0.4387 MYRAAASRLTLLKGNGRTLGATRFATSSAVATRPSSGSLFSWLTGETSSPLPSLDVPLGGVALPAPLPDYVEPSKTKITTLSNGLKIASETSTNPAASIGLYLDCGSLYETPLSSGASHLLEKMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEEVQKVKAELGELSNNPQGLLLEAIHSAGYSGALANPLLASESALNRLNGSFLEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPSAPRPEEPKSIYVGGDFRRQGESGDTHVAIAFEVPGGWQKEKDAVILTVIQILMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSSDFVAKAVDVAAKELIAIASPGQVSQVQLNRAKESTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDEITLNDITKISQKIISSPLTMASYGDVINVPSYESVSSKFHAK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00283 505 PANTHER METALLOPROTEASE 69 493 - -
Rops7g00283 505 Gene3D - 67 278 - -
Rops7g00283 505 SUPERFAMILY LuxS/MPP-like metallohydrolase 303 495 IPR011249 GO:0046872
Rops7g00283 505 Gene3D - 285 504 - -
Rops7g00283 505 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
Rops7g00283 505 Pfam Peptidase M16 inactive domain 243 421 IPR007863 -
Rops7g00283 505 FunFam mitochondrial-processing peptidase subunit alpha 290 498 - -
Rops7g00283 505 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 285 IPR011249 GO:0046872
Rops7g00283 505 Pfam Insulinase (Peptidase family M16) 87 230 IPR011765 -
Rops7g00283 505 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00283 Rops-Chr7 3670247 3674606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00283 K01412 - gmx:100810990 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00283 7 3670247 3674606 Rops7g00283 7 3670247 3674606 ECH
Rops7g00283 7 3670247 3674606 Rops4g02090 4 47245189 47250541 PCT