Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02090 ATGTACAGAGCAGCAGCTTCATCACTCAAGAGGCATCTCAAGGGCCATGGTGGCAACTTGGGAGCTACAAGGTTTGCAACTTCAGCCGCGGTAGCTACAAGGTCTTCCTCTGGTGGTTTGTTTAGTTGGCTTACCGGGGAACGGTCTAGTTCTCTTCCTCCTTTGGACACACCACTTGGTGGTGTTGCTCTCCCTGATCAACTACCAGATTATGTCGAACCAAGCAAGACCAAGATCACAACTCTCCCCAATGGACTCAAAATAGCATCAGAGACCTCTCCAAACCCTGCAGCCTCAATTGGATTATATCTTGATTGTGGTTCCATCTATGAGACACCATTGTCAAGCGGGGCTTCACACTTGCTAGAGCGAATGGCTTTCAAGAGCACAACAAACCGTAGTCACTTTCGTATTGTGAGGGAAGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCTCGAGAGCAAATGGGCTACACATTTGATGCTTTAAAGACCTATGTTCCACAAATGGTTGAATTGCTGATTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGAAAGGTGAAAGCAGAGCTTGGAGAGCTCTCAAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAATCAGCACTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTTGTTGCTGAGAATTACACAGCACCTAGAATGGTTCTTGCAGCATCTGGGGTTGAGCATGAAGAGCTTCTATCTGTTGCTGAGCCACTTTTCTCTGATCTGCCAAGTGTTCCCCGTCCTGAAGAACCAAAATCTACCTATGTTGGGGGTGATTTTCGTCGTCAAGGTGAATCAGGGGGTACCCATGTTGCTATTGCTTTTGAAGTGCCCGGTGGCTGGCAAAAAGAAAAAGATGCTATGGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCTGGTGGCCCTGGGAAAGGGATGCACTCGAGGCTATATCTTCGTGTATTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGCATCTTCAATAATACAGGACTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGTGCCAAAAGCTGTGGATATAGCTGCCAAAGAACTAATAGCAATTGCATCACCTGGACAAGTTTCACAGGTACAGCTTGACCGTGCCAAAAAATCCACGAAGTCTGCAGTTTTGATGAATCTGGAATCTAGAATGATTGCATCAGAAGATATAGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTGTGGAGCAGTTTTTGAAGGCTGTAGATGAAATCACTTTGAATGATATCACTAAAATTGCTCAGAAGATCATTTCCTCACCTTTGACTATGGCATCATATGGGGATGTCATAAATGTGCCCAGTTATGAATCTGTGAACAGCAAGTTCCATGCAAAATGA 1521 0.4504 MYRAAASSLKRHLKGHGGNLGATRFATSAAVATRSSSGGLFSWLTGERSSSLPPLDTPLGGVALPDQLPDYVEPSKTKITTLPNGLKIASETSPNPAASIGLYLDCGSIYETPLSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLIDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPESALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLSVAEPLFSDLPSVPRPEEPKSTYVGGDFRRQGESGGTHVAIAFEVPGGWQKEKDAMVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFVPKAVDIAAKELIAIASPGQVSQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDEITLNDITKIAQKIISSPLTMASYGDVINVPSYESVNSKFHAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02090 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Rops4g02090 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Rops4g02090 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Rops4g02090 506 PANTHER METALLOPROTEASE 70 494 - -
Rops4g02090 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Rops4g02090 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Rops4g02090 506 Gene3D - 291 503 - -
Rops4g02090 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
Rops4g02090 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 303 496 IPR011249 GO:0046872
Rops4g02090 506 Gene3D - 67 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02090 Rops-Chr4 47245189 47250541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02090 K01412 - gmx:100810990 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02090 4 47245189 47250541 Rops4g02090 4 47245189 47250541 ECH
Rops7g00283 7 3670247 3674606 Rops4g02090 4 47245189 47250541 PCT