Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00166 ATGAAGAATCAATGTTGTGAAGAATCGGTTCCAGAAAAATGTGGAAGCCAATTATCCTCAGAATGTTGCTGGTTCGATGATGCATGCATCCTTGACATGGATTACTTTGTGAAGACACTTTCAGGCATCAAAGAGAAAGGTGTTCGTGCGGATTTGGTTGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCCTGATCTCTCTACAAGTGACACGTGTATCAGACAGTTTGAGGAGTCACCTGAGAGTGTCACAAGTTCATGGATGAAGAAGAGGTTCTTTGTGGAAACCTTGGTGGGTGTTTTGCCTCCTGAGAAGGATTCCATCCCATGCAACTTCCTCCTTCGCCTTCTCAGAACTGCCAACATGGTTGGTGTTGATGCCACTTATAGACAAGAGCTTGAGAAGCGGATTTCATGGCAGCTAGACCAAGCTTCTCTCAAAGAGCTTATGATACCCTCTTTCAGTCACACTTGTGGGACTCTCTTGGATGTTGAGCTTGTCATTAGGTTGGTTAAGAGGTTTGTGAGTTTGGATCATGAAGGAGCTAAAACTGGTGCTGCTTTGGTTAAGGTGGCTAAGTTGGTTGATTGCTTTCTTGCTGAGGCTGCTGTTGATGCTAATCTGAGCTTGTCTGAGTTTGTTGCACTTGCGGGTGCTCTTCCAAGCCATGCAAGAGCCATAGATGATGGTTTGTATAGAGCCATTGACACTTATCTAAAAGCACATTCAGGTGTGTCAAAGCAAGAAAGGAAGGTTCTGTGTAGGCTGATTGATAGCCGGAAACTCACACCAGAGGCCTCACTTCATGCAGCTCAAAATGAAAGGTTGCCTGTTAGAGCTGTCATTCAGGTGCTTTTCTCTGAACAAACCAAACTCAATCGCCAAATGGATTGGAGTGGCTCTTTCAGTGGCTTGAGGAGCCCGAATGGCAGGTTTGACCCACCAGCAAGATGCCTTTCAAAGCGTGAAATGAATGCTCAGCAAATGGAGATAAAGAAGCTGAAGGAAGAAGTTTACAGGCTGCAAAGCCAGTGCAATGCCATGCAAGTGCAGATGGAGAGGATGGCAGAGAAGAAGAAGGGGTTCTTCAAATGGAAGAAGTTTGGGATGCATGCGTTTAGTAAGAGCGTGGAAGAGGTGGAGAATATTGAAGAAGAGGCTGAAAGGGAAGTTGGGTTTGGAAGGCAAACGCCTATGGACATGAAAACCAATCTGGTCCAAGGTAGGATTCCTCACAAGTGGAGGAGGAAATCTATGTCCTGA 1269 0.4563 MKNQCCEESVPEKCGSQLSSECCWFDDACILDMDYFVKTLSGIKEKGVRADLVGSIITHYASKWLPDLSTSDTCIRQFEESPESVTSSWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVDATYRQELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVSLDHEGAKTGAALVKVAKLVDCFLAEAAVDANLSLSEFVALAGALPSHARAIDDGLYRAIDTYLKAHSGVSKQERKVLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRQMDWSGSFSGLRSPNGRFDPPARCLSKREMNAQQMEIKKLKEEVYRLQSQCNAMQVQMERMAEKKKGFFKWKKFGMHAFSKSVEEVENIEEEAEREVGFGRQTPMDMKTNLVQGRIPHKWRRKSMS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00166 422 Pfam NPH3 family 23 269 IPR027356 -
Rops7g00166 422 Coils Coil 372 392 - -
Rops7g00166 422 Coils Coil 326 353 - -
Rops7g00166 422 ProSiteProfiles NPH3 domain profile. 22 293 IPR027356 -
Rops7g00166 422 PANTHER OS12G0117600 PROTEIN 6 366 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00166 Rops-Chr7 2345269 2347699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00166 24 356 EF-hand Containing Proteins AT3G44820 31.720 3.09e-52 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00166 - - gmx:100777820 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00166 7 2345269 2347699 Rops7g00166 7 2345269 2347699 ECH
Rops7g00166 7 2345269 2347699 Rops4g02208 4 48777888 48780495 PCT