Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00150 ATGGAAGCGGCGCGGCGGTTGGCGTTGCGTTTGCGTGTGGTTCCGATAGGCGTGTTCCAAAACGGTGTCGTAATACCCTCAGCTTCAGGTAGCAGCAGAAGAGTATTGAGGACGAAATGGTTCATGTTCAGCTCATCAGCTTCATATTCACCAAGAGCAGGGTGGTTTGTGGGTGTTTCAGGGCACAAAAAAGTGAACTTGCCAAACATTGTGAAAGCTGGAGACCCAGTTCTACACCAGCGTGCTCAAGAAGTTGATCATAGTGAGATGAAATCGGAGAAAGTGCAGAAGATCATCGATAACATGATCCTTGTCATGAGAAAAGCACCTGGGGTTGGTCTTGCTGCCCCACAAATTGGAATCCCTTTAAAGATAATTGTTCTGGAAGATACTAAAGAATATATGAGATACGACACAGAGGAAGAGATTAAAGCACAGGATAGAAGACCTTTTGATCTTTTGGTGATCCTGAATCCCAAGATAAAGAAGAGGAGCAACAGGACTGCCCTATTTTTTGAAGGGTGCTTGAGTGTTGATGGATTTCAAGCTGTGGTAGAGCGGTACCTCGATGTTGAGGTTTCAGGTTTTGATCGTTACGGTGAACCCATCAAAATAAATGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACTTGGATGGAACACTGTATGTTGATAAGATGGTACCTAGAACTTTCAGAACTGCAAAGAACATTGATCTGCCTCTTGCAAATGGGTGCCCCAAACTTGGCCCCCGTTAA 771 0.4514 MEAARRLALRLRVVPIGVFQNGVVIPSASGSSRRVLRTKWFMFSSSASYSPRAGWFVGVSGHKKVNLPNIVKAGDPVLHQRAQEVDHSEMKSEKVQKIIDNMILVMRKAPGVGLAAPQIGIPLKIIVLEDTKEYMRYDTEEEIKAQDRRPFDLLVILNPKIKKRSNRTALFFEGCLSVDGFQAVVERYLDVEVSGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRTAKNIDLPLANGCPKLGPR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00150 256 NCBIfam peptide deformylase 69 235 IPR023635 GO:0042586
Rops7g00150 256 Gene3D Peptide deformylase 65 254 IPR036821 -
Rops7g00150 256 FunFam Peptide deformylase 67 250 - -
Rops7g00150 256 SUPERFAMILY Peptide deformylase 64 239 IPR036821 -
Rops7g00150 256 CDD Pep_deformylase 70 227 IPR023635 GO:0042586
Rops7g00150 256 PANTHER PEPTIDE DEFORMYLASE 64 248 IPR023635 GO:0042586
Rops7g00150 256 Hamap Peptide deformylase [def]. 66 242 IPR023635 GO:0042586
Rops7g00150 256 Pfam Polypeptide deformylase 69 234 IPR023635 GO:0042586
Rops7g00150 256 PRINTS Peptide deformylase signature 204 233 IPR023635 GO:0042586
Rops7g00150 256 PRINTS Peptide deformylase signature 100 129 IPR023635 GO:0042586
Rops7g00150 256 PRINTS Peptide deformylase signature 173 184 IPR023635 GO:0042586
Rops7g00150 256 PRINTS Peptide deformylase signature 185 203 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00150 Rops-Chr7 2059303 2070060 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00150 K01462 - qsu:112029399 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00150 7 2059303 2070060 Rops7g00150 7 2059303 2070060 ECH
Rops7g00150 7 2059303 2070060 Rops4g02226 4 48923016 48925603 PCT