Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02226 ATGGAGGCCTCACAGTTGCAGCGTGTGCTTCCCATATCTGTTGCCAAAAATTCACACTTTACACGCCCAACTGCAACCCCATTATCTGTAATTGCAATATCAAGGCCACCATTGGGATTTTTGAGCTTAGCATCTTCTCAAACTGCCATTGCCACAGTGAGAGCAGGGTGGTTTTTGGGTCTTACTTCAGCAGATAAAAAGGTGAACTTGCCTGACACTGTCAAAGCTGGTGACCCTGTTCTGCATGAGCTTGCTCAGGAAGTTGGTCCTAATGAGATAAAGTCTGAGAGAGTGCAGAAGATCATTGATGACATGATCAGGGTCATGAGGAAAGCTCCTGGGGTTGGTCTAGCTGCTCCCCAGATTGGAATTCCTTCAAGGATAATTGTTTTGGAAGATACCAAAGAATATATTAGTTATGCCCCAAAGGAAGAGATCAAAGCTCAAGATAGACAACCTTTTGATCTTTTGGTGATCGTGAATCCCAAGCTAGAGAAGAAGAGCAATAGGACTGCCCTATTTTTTGAAGGGTGCTTGAGTGTTGATGGATTTAGAGCAGTGGTGGAGCGATACCTTGATGTTGAGGTTACAGGTTTGGATCGAGATGGTATGCCAATCAAAATAACTGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACTTGGATGGAACTCTGTATGTTGATAAGATGGTACCTAAAACTTTCAGAACTGTAGACAACTTATTCCTGCCTCTTGCCAAGGGATGCCCTAAACTTGGCCCTCGCTAA 780 0.4436 MEASQLQRVLPISVAKNSHFTRPTATPLSVIAISRPPLGFLSLASSQTAIATVRAGWFLGLTSADKKVNLPDTVKAGDPVLHELAQEVGPNEIKSERVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRQPFDLLVIVNPKLEKKSNRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGMPIKITASGWQARILQHECDHLDGTLYVDKMVPKTFRTVDNLFLPLAKGCPKLGPR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02226 259 NCBIfam peptide deformylase 75 237 IPR023635 GO:0042586
Rops4g02226 259 PRINTS Peptide deformylase signature 188 206 IPR023635 GO:0042586
Rops4g02226 259 PRINTS Peptide deformylase signature 176 187 IPR023635 GO:0042586
Rops4g02226 259 PRINTS Peptide deformylase signature 103 132 IPR023635 GO:0042586
Rops4g02226 259 PRINTS Peptide deformylase signature 207 236 IPR023635 GO:0042586
Rops4g02226 259 Pfam Polypeptide deformylase 74 237 IPR023635 GO:0042586
Rops4g02226 259 CDD Pep_deformylase 74 230 IPR023635 GO:0042586
Rops4g02226 259 PANTHER PEPTIDE DEFORMYLASE 67 245 IPR023635 GO:0042586
Rops4g02226 259 FunFam Peptide deformylase 70 253 - -
Rops4g02226 259 SUPERFAMILY Peptide deformylase 70 242 IPR036821 -
Rops4g02226 259 Hamap Peptide deformylase [def]. 69 245 IPR023635 GO:0042586
Rops4g02226 259 Gene3D Peptide deformylase 68 258 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02226 Rops-Chr4 48923016 48925603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02226 K01462 - gmx:100784292 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02226 4 48923016 48925603 Rops4g02226 4 48923016 48925603 ECH
Rops7g00150 7 2059303 2070060 Rops4g02226 4 48923016 48925603 PCT