Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00130 ATGCTTAGGCTAAAGATGATGTTCTCTTCTTTCTATCTTTGGCTTCTTCTCTTGTTCTCAGTATTATTTTGTCACGTTTTAGGAGCATTTACAGGAACATATGGAGTAAACTATGGTAGGATAGCTGACAACCTGCCTCCCCCAGAAAGCGTGGTTACCCTACTCAAAGCAGCAAAAATTAAGAACGTTAGGATATATGATGCGGATCATCAAGTCCTCAGTGCCTTCAAAGGGTCTGGGATTGAAATTGTGGTTGGACTTGGTAATGAATTTCTGAAGGACATAAGTGTAGGCGAGGATGGTGCCATTAGATGGGTCAAAGAAAATGTTCAGCCATTTCTTCCAGGTACTAAAATTAGTGGAATTGCAGTGGGAAATGAAATCTTGGGAGACAAAAATGTGGAACTCTGGGAAGTTTTGCTGCCTGCAGCAAAAAATGTTTATAATGCCCTTGATAAGCTTGGTTTAACAAAAGATATTCAGGTGTCAAGTCCTCATTCAGAGGCTGTTTTTGCTAGTTCCTTTCCTCCATCTTCATGCATTTTTAAGGAAGATGTCCTCCCATACATGAAGCCTCTCTTACAATTCTTCTCACAAATTGGCTCTCCTTTCTTCATAAATGCATATCCTTTCTTGGCCTATAAGAATGATCCCCAACATATTGACCTTAACTATGCTCTCTTCAAAAAAAGTCCTGGGATTTATGATGCAAAGACTAAACTACATTATGATAACATGTTTGATGCTCAAGTTGATGCAGCCTATGCTGCCTTGGAGAAGGCTGGGTTTGAGAAGACGGAGGTTATTGTTTCTGAGACTGGTTGGGCTTCTCATGGTGATGAAAATGAAGCTGGAGCCACAGTGGAAAATGCAAGGACTTACAATAAATATTTGCGCAAGAAGCTACTTAGAAAGAAGGGGACCCCTTATAGGCCTAAAAAGGTCGTGAGGGCTTATATCTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGTCCTACATCAGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTTACTGGTCTTGTACCTTCTTCAGCAACTTCATCTTTCCTTTCCTTCAAGGGTATTGGATCCTCTTTCCTAATGGTTTTTACAAGTTGTGCTGCTCTTCTTCTTGTAGCACCGTAA 1173 0.4024 MLRLKMMFSSFYLWLLLLFSVLFCHVLGAFTGTYGVNYGRIADNLPPPESVVTLLKAAKIKNVRIYDADHQVLSAFKGSGIEIVVGLGNEFLKDISVGEDGAIRWVKENVQPFLPGTKISGIAVGNEILGDKNVELWEVLLPAAKNVYNALDKLGLTKDIQVSSPHSEAVFASSFPPSSCIFKEDVLPYMKPLLQFFSQIGSPFFINAYPFLAYKNDPQHIDLNYALFKKSPGIYDAKTKLHYDNMFDAQVDAAYAALEKAGFEKTEVIVSETGWASHGDENEAGATVENARTYNKYLRKKLLRKKGTPYRPKKVVRAYIFALFNENLKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSSFLSFKGIGSSFLMVFTSCAALLLVAP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00130 390 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 356 IPR044965 GO:0004553|GO:0005975
Rops7g00130 390 FunFam Glucan endo-1,3-beta-glucosidase 14 32 358 - -
Rops7g00130 390 Pfam Glycosyl hydrolases family 17 35 353 IPR000490 GO:0004553|GO:0005975
Rops7g00130 390 Gene3D Glycosidases 33 356 - -
Rops7g00130 390 SUPERFAMILY (Trans)glycosidases 34 352 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00130 Rops-Chr7 1835535 1837457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00130 21 362 Glycoside Hydrolase AT3G15800 73.761 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00130 - - gmx:100815468 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00130 7 1835535 1837457 Rops7g00130 7 1835535 1837457 ECH
Rops7g00130 7 1835535 1837457 Rops4g02242 4 49119163 49120974 PCT