Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02242 ATGCTCAAACAACAAATGATTTTTTCTTCCTCCAGTTCCTTCTTTCTTTGGCTTCTTCTCATCTTCTGTGTCACATTTTCTCACGTTTTAGGGAATAATGCATTTATAGGAACTTATGGAGTAAACTACGGTAGGATAGCAGACAATCTACCTGCCCCCCACAGTGTGGTTACATTGCTCAAAGCTGCAAAGATTAAAAATATTAGAATATATGATGTTGATCCTCAAGTCCTCAGTGCCTTCAAAGGTTCTGGACTTCAGATCAGCGTTTGTCTTCCTAATGAATTACTGAAAGATATAGGTGTAGGGGAGGATCGTGCCATGAATTGGATCAAAGAAAAAGTTCAGCCATTTCTTCCAGGAACTAAAATTCGTGGAATTGCAATTGGAAATGAAATCTTGGGAGGCGCAGATGTGGAACTTTGGGAGGCTTTGCTGCCTGCAGCAAGAAATATTTACAGTGCACTTGATAGGCTTGATTTAACACATGAAATTGAGGTGTCAAGTCCACATTCAGAGGCTGTATTTGCTAATTCTTATCCTCCATCTTCATGCACTTTTAGGGGAGATATCCTCCCTTACATGAAGCCCCTCTTACAGTTCTTCTCACAAATTGGCTCTCCTTTTTACATAAATGCATACCCTTTCTTGGCCTATAAGAATGACCCCCAACATATTGATATTAACTATGCTCTCTTCAAAAAAAATCCAGGGATTTATGATGCCAAGACTAAGTTACACTATGATAACATGTTTGAGGCTCAAATTGATGCAGCTTATGTTGCATTGGAGAAGGTTGGATTTGACAAGATGCAAGTGATAGTTTCCGAGACTGGTTGGGCTTCTCGTGGGGATGAGAATGAAGCTGGAGCTACAGTGAAAAATGCAAAGACATACAATAAAAATTTGCGCAAGCGATTACTCAAGAAGAAGGGTACCCCTTATAGGCCAAAGATGGTGGCAAAGGCTTATATATTTGCTTTGTTTAATGAGAATTTGAAACCTGGGCCAACATCCGAGAGAAACTTTGGATTGTTCAAACCAGATGGAAGCATTTCATATGATATAGGCTTTCCTGGACTTGTACCTTCCTCAGCAACGTCTTCTTTTCTTTCCTTCAAGGGTATTGGATCTTCATACGTAATGGTTTCTACAAGTTGTGCTGCTCTTCTTCTTCTTCTTCTTGTAACATTGTAA 1197 0.396 MLKQQMIFSSSSSFFLWLLLIFCVTFSHVLGNNAFIGTYGVNYGRIADNLPAPHSVVTLLKAAKIKNIRIYDVDPQVLSAFKGSGLQISVCLPNELLKDIGVGEDRAMNWIKEKVQPFLPGTKIRGIAIGNEILGGADVELWEALLPAARNIYSALDRLDLTHEIEVSSPHSEAVFANSYPPSSCTFRGDILPYMKPLLQFFSQIGSPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFEAQIDAAYVALEKVGFDKMQVIVSETGWASRGDENEAGATVKNAKTYNKNLRKRLLKKKGTPYRPKMVAKAYIFALFNENLKPGPTSERNFGLFKPDGSISYDIGFPGLVPSSATSSFLSFKGIGSSYVMVSTSCAALLLLLLVTL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02242 398 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 359 IPR044965 GO:0004553|GO:0005975
Rops4g02242 398 Gene3D Glycosidases 38 360 - -
Rops4g02242 398 Pfam Glycosyl hydrolases family 17 40 358 IPR000490 GO:0004553|GO:0005975
Rops4g02242 398 SUPERFAMILY (Trans)glycosidases 39 357 IPR017853 -
Rops4g02242 398 FunFam Glucan endo-1,3-beta-glucosidase 14 37 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02242 Rops-Chr4 49119163 49120974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02242 34 367 Glycoside Hydrolase AT3G15800 75.224 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02242 - - gmx:113002394 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02242 4 49119163 49120974 Rops4g02242 4 49119163 49120974 ECH
Rops7g00130 7 1835535 1837457 Rops4g02242 4 49119163 49120974 PCT