Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00123 ATGTCTGCTGCGGTGTGTGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCTCCTTCACCCCCAGTTTCCAAGAGGCTTCGTTGTTCCTCTTCCCCTATTCGCCTCTCGCTTCCTACCCTCGTCGATCACCTTCGCTCCCTCTTCCCTCATATGGATGACCAGGTCCTCGAGAGGGCACTCCAAGAATGTAGCAACGATCTAGATGCTGCCATCAAGAGGCTGCACGGCTTGTGCTTGGGATCTGCAGATGAAAATTCTGGAACTGTTCCACAACCTGAGGCTAACATCGAGACAGAAGAAGAAGCAATTGCAGGTACCTTAGAAGATAATGGGGATGTTTCTGATTGTGGGAATCAATCAGCTCCTAACAATCTTCCCGCAGATGGGGCAGAATGGATCGACTTGTTTGTCAGCGAAATGACGTGTGCTACTAGTGTTGATGATGCCAGAGCACGTGCTGCTAGACTGCTGGAGGTTCTAGAGAAATCAATCAGTGCACATGCGAGTTCCGGGGCAGCAACTGCTCTACAGAGGGAAAATTTGATGCTGAAGGATCAAATTGAAGCGTTGACCAAGGAGAAAAATTGTTTCAAGAGTGCGTTTAGAATCCAGCTTGAACGTCTTTCTGATTACGAGGATAAGAACCAAGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATACCAGGAGCAGATCAGAACTCTTGAGGTAAGCAACTATGCTTTGCGAATGCATTTGAATCAGGCACAACAGTACAACCCTTTTCCTGGGCGTTTCCCTCCTGATGGTGCCTTCTAA 798 0.4812 MSAAVCGSKRSFFEDLPPSPPVSKRLRCSSSPIRLSLPTLVDHLRSLFPHMDDQVLERALQECSNDLDAAIKRLHGLCLGSADENSGTVPQPEANIETEEEAIAGTLEDNGDVSDCGNQSAPNNLPADGAEWIDLFVSEMTCATSVDDARARAARLLEVLEKSISAHASSGAATALQRENLMLKDQIEALTKEKNCFKSAFRIQLERLSDYEDKNQELQQLKQLVSQYQEQIRTLEVSNYALRMHLNQAQQYNPFPGRFPPDGAF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00123 265 SUPERFAMILY UBA-like 38 81 IPR009060 GO:0005515
Rops7g00123 265 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Rops7g00123 265 Gene3D - 39 80 - -
Rops7g00123 265 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Rops7g00123 265 CDD CUE 40 74 - -
Rops7g00123 265 Coils Coil 173 193 - -
Rops7g00123 265 Coils Coil 201 238 - -
Rops7g00123 265 Pfam CUE domain 40 74 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00123 Rops-Chr7 1760079 1762250 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00123 - - gmx:100815998 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00123 7 1760079 1762250 Rops7g00123 7 1760079 1762250 ECH
Rops7g00123 7 1760079 1762250 Rops4g02252 4 49240537 49246256 PCT