Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00119 ATGGAGTTCCCTGATTCAGAAACACAACCTAATAGGCGTAGGAAAAAGAAATCTATAGTCTGGGAACACTTCACTGTGAAAACTGATGGACCTGGATGTGCCAAGGCTTACTGTAAAAGGTGCAAAAAATCATTTGCTTATATAAAAGGTTCAAAACAAGCTGGCACCAGCCATCTCAAGAGACACATTTCTCTTGGAATCTGTCAAAAAAATCAGCAAAACCTGTATTCCAAAACCGATACTGATCCACAAAAGAAACGAGCAAGATCAAAACCTTGTTTTGCTGCTATCTCATTTGATCAGGAGTGTTGCAACGACAAGATTGCTAAAATGATTATTTTACATGATTATCCACTTCATATCGTGGAACACCAAGGTTTTGTTAATTTTGTGCGGGCACTTCAACCCCAATTCAATCCACTGAGCTTTAATGCTGTCCAAGAGGATTGTGTTGCTATGTACCTCAGACAGAAGCAAAACCTGTTAAATCTTATTGATAGGATTCCTGGCCGAGTCAACCTCACCTTGGACTTATGGACTTCAAATCAGACATCGGCCTATATTTTTCTTCGAGGACACTTCATTGATGGTGATTGGAACTTACATCATCCCATTCTTAATGTTTTGATGGTCCCATTTCCTGATTCTGATGGTTCCTTGAATCAAACTATAGCGACCTGCCTACGTGATTGGCATTTAGAGGGTCGCCTATTGACTCTTGTGCTTGATAAATTCTTCTCCAATGAGACTTTGGTGGGAGATTTGAGAGGTCTCCTCTCTATTAAGAACCCTGTAATCCTCAATGGTCAATTATTAAGCCAGAACTGTTATGCTCGTGTGCTTAGTCGCCTTGCATCAGATGCCTTATGGGCAATGAGAGAAACTGTTGCTAAAGTTCGCAAGAGTGTGAAGTACGTGAAATCTTCTGAATCTCATGAAGAGAAGTTTTTTGAGCTGAAGCAACAACTTCAACTTCCTAATATGACGGACCTTGTAATTGATGACCAAAGTAAATGGGACACAGTTTACCAGATGCTTGTTGCTGCCTGTGAATTAAAGGAAGTGTTCGTCTGTTTTGATGCCTATGATCCTGATTACAGAATGACTGTGACAATGGATGAATGGAAGCAGGTGGAAAAACTCTGTTCATATTTGAAGTGTTTGTATGACGCTGCTAATATTTTAACTGTCCAACCATACCCAACTGCAAACTTATTTTTCCCTGAAGTGTCAAAACTTCACGTGGAGTTGACTCATGCAGCCTTAAGCCAGGATCCTTTCTGTAGTAGTTTGATTAGGCCTTTGCAAGAGAAGTTTGCTCAATATTGGAGAGAGAGCTGCTTCATCTTGGCAATTGCTGTAGTCATGGATCCAAGGTATAAAATGAAACTTGTGGAATCCACATTTACTAAGATATTTGGTGAGAATGCTGAGTCATGGATAAGAATTGTCGAGGATGGTCTTAATGAACTGTTCCTTGAATATAGTATCATACAAGTGCTTCCTTTTACAGAAACAAATCACGATGAAGGGAATGAGGCTACGAAGATTGAGTCATTTCAAGAAGGGTCACTTGATGGATCCCTTTTTGCTGCTGAAGATGGACTTTCTGATATTGAATTTTATATATCTGACTTCACTGGTAACCAACAATTCAAGTCAGAATTGAATGAGTACTTGGAACAGCCTCTAGAGCCCAAAGTACAAGAATTTGATATTCTGAGCTGGTGGAGAATAAACGAATTGAAGTACCCAATATTGTCTAGAATGGCATCTGATATTTTGTCTATGCCAGCATCCACTCTCTCTGCAGATTCTGTTTTTGATACAGAAATTCGAAAAATGGATAGCTACCGGAGTTCATTAGACTCACCGACTCTTGAGGCTCTTATTTGTACCAAGGACTGGTTCCAATATGAATCATTACCCATCGATGTTTCAAATGAACTTGTGAAAGTGGAATATTAG 1968 0.3948 MEFPDSETQPNRRRKKKSIVWEHFTVKTDGPGCAKAYCKRCKKSFAYIKGSKQAGTSHLKRHISLGICQKNQQNLYSKTDTDPQKKRARSKPCFAAISFDQECCNDKIAKMIILHDYPLHIVEHQGFVNFVRALQPQFNPLSFNAVQEDCVAMYLRQKQNLLNLIDRIPGRVNLTLDLWTSNQTSAYIFLRGHFIDGDWNLHHPILNVLMVPFPDSDGSLNQTIATCLRDWHLEGRLLTLVLDKFFSNETLVGDLRGLLSIKNPVILNGQLLSQNCYARVLSRLASDALWAMRETVAKVRKSVKYVKSSESHEEKFFELKQQLQLPNMTDLVIDDQSKWDTVYQMLVAACELKEVFVCFDAYDPDYRMTVTMDEWKQVEKLCSYLKCLYDAANILTVQPYPTANLFFPEVSKLHVELTHAALSQDPFCSSLIRPLQEKFAQYWRESCFILAIAVVMDPRYKMKLVESTFTKIFGENAESWIRIVEDGLNELFLEYSIIQVLPFTETNHDEGNEATKIESFQEGSLDGSLFAAEDGLSDIEFYISDFTGNQQFKSELNEYLEQPLEPKVQEFDILSWWRINELKYPILSRMASDILSMPASTLSADSVFDTEIRKMDSYRSSLDSPTLEALICTKDWFQYESLPIDVSNELVKVEY* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00119 655 Pfam Domain of unknown function (DUF4413) 398 495 IPR025525 GO:0003677
Rops7g00119 655 SUPERFAMILY beta-beta-alpha zinc fingers 18 65 IPR036236 -
Rops7g00119 655 Pfam hAT family C-terminal dimerisation region 555 637 IPR008906 GO:0046983
Rops7g00119 655 PANTHER BED FINGER-RELATED 149 644 IPR045259 -
Rops7g00119 655 SMART bed5 15 71 - -
Rops7g00119 655 ProSiteProfiles Zinc finger BED-type profile. 15 75 IPR003656 GO:0003677
Rops7g00119 655 SUPERFAMILY Ribonuclease H-like 165 638 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00119 Rops-Chr7 1720471 1723525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00119 - - gmx:106796308 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00119 7 1720471 1723525 Rops7g00119 7 1720471 1723525 ECH
Rops7g00119 7 1720471 1723525 Rops4g02254 4 49259356 49263368 PCT