Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02816 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGATGATCTCACAAAAAGAGACAGCAAGGAAACAAGTGCACTGGTTGTTTGTTTTGGTGAAGTGTTAATAGACTTTGTGCCAACAGTTAGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCAGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCTCTAGGCTTGGAGGTTCATCTGCATTTATGGGCAAGGTTGGAGCAGATGGATTTGGGTATATGTTGGCTGATATTTTAAAGCAGAACAATGTTGAGACATCTGGCATGCGGTTTGATCCTAATGCAAGGACCGCCTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAGTTCTTGTTTTTCCGGAATCCTAGTGCTGACATGCTTCTTCATGAGTCGGAGCTTGATCAAAATCTTATAAAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTGTGGAACCATGCAAGTCAGCTCATCATGCTGCTTTGAAAATTGCTAAGGACTCTGGTTGCGTTCTCTCATATGATCCGAATTTGAGATTGGCACTATGGCCATCCGCTGAGGCTGCTAGGGAAGGCATAATGAGCATATGGGATTATGCCGATGTCATAAAGATGAGTGAAGATGAGATTGCATTTTTGACTGGTGGTGACGATCCTTATGATGATAATGTTGTGTTAAGGAAGCTCTTTCACCCTAATCTCAAGCTTTTAATTGTTACTGAAGGGTCAGAGGGTTGTAGATATTACACTAAGGAATTTAAGGGCAGGGTTGCAGGTGTTAAAGTTAAACCTATTGACACAACTGGTGCAGGTGATGCTTTTGTTGGTGGGATTATCTACAGCTTAGCTTCTGACCCAAGTCTTTTACAGGATGAGGAGCGACTCCGAAAAGCTCTATATTTTGCCAATGTATGTGGTGCTATCACTGTAACAGAGAGAGGGGCAATTCCTGCACTACCTACCATAGAAGCTGTCCTACAATTTGGTGCATAA 1023 0.433 MAQFTPSGKSDDLTKRDSKETSALVVCFGEVLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFMGKVGADGFGYMLADILKQNNVETSGMRFDPNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDQNLIKKAKIFHYGSISLIVEPCKSAHHAALKIAKDSGCVLSYDPNLRLALWPSAEAAREGIMSIWDYADVIKMSEDEIAFLTGGDDPYDDNVVLRKLFHPNLKLLIVTEGSEGCRYYTKEFKGRVAGVKVKPIDTTGAGDAFVGGIIYSLASDPSLLQDEERLRKALYFANVCGAITVTERGAIPALPTIEAVLQFGA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02816 340 CDD bac_FRK 24 326 - -
Rops6g02816 340 Gene3D - 21 340 IPR029056 -
Rops6g02816 340 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301
Rops6g02816 340 FunFam Probable fructokinase-2 22 339 - -
Rops6g02816 340 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Rops6g02816 340 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Rops6g02816 340 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Rops6g02816 340 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Rops6g02816 340 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016301
Rops6g02816 340 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Rops6g02816 340 PANTHER HEXOKINASE FAMILY MEMBER 24 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02816 Rops-Chr6 50505059 50509074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02816 K00847 - gmx:100818404 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00785 5 14853082 14858240 Rops6g02816 6 50505059 50509074 ECH
Rops6g02816 6 50505059 50509074 Rops6g02816 6 50505059 50509074 ECH
Rops5g00785 5 14853082 14858240 Rops6g02816 6 50505059 50509074 PCT