Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00785 ATGGCTCACTCTACCCCCTCAGGTAAATCCAATGATCTCACAAAAGAAGACTACAAGGAAACAAGTTCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACAGTGGGAGGAGTATCACTGGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGAGCTCCTGCCAATGTGGCTGTTGGTATCTCAAGACTTGGGGGTTCATCTGCTTTTGTAGGAAAGGTTGGAGCAGATGAATTTGGGTACATGTTGGCTGACACTTTAAAGCAGAACAATGTTGATACTTCTGGCATGAGATTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAGTTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAGTCAGAACTTGATAAAAATCTCATAAAGCAGGCTAGAATATTTCATTATGGCTCTATCAGCTTGATTGATGAGCCGTGCAAGTCAGCTCACCTTGCTGCTATGAGCATCGCCAAAAGCTCTGGTTGCATTCTCTCTTATGATGCAAATTTGAGATTGGCACTATGGCCATCAGCAGAGGCTGCACGGAAAGGCATAATGGATATATGGGATCAAGCTGATGTTATAAAGATTAGTGAGGATGAGATTACATTTTTGACTGGAGGTGATGATCCTTATGATGATAATGTTGTTTTGAAGAAACTTTTTCATCCTAATCTCAAGCTCTTAATCGTTACTGAAGGGTCAGAGGGTTGTAGATATTACACGAAGGAATTTAGGGGCAGGGTTGGAGGTGTTAAAGTTAAACCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTCTATACAGTATAGCTTCTGATCCAAGTATTTTTCAGGATGAGAAACAACTCCGAAAGGCTTTGTATTTTGCTAATGTATGTGGTGCCATCACTGTAACTGAAAGAGGTGCAATCCCTGCACTTCCTACAAAGGAAGCTGTGTTGCAATTCTTACCAGAAGCAGCTACAATACAACAGAACTAA 1047 0.4174 MAHSTPSGKSNDLTKEDYKETSSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLADTLKQNNVDTSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDKNLIKQARIFHYGSISLIDEPCKSAHLAAMSIAKSSGCILSYDANLRLALWPSAEAARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSEGCRYYTKEFRGRVGGVKVKPVDTTGAGDAFVSGILYSIASDPSIFQDEKQLRKALYFANVCGAITVTERGAIPALPTKEAVLQFLPEAATIQQN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00785 348 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Rops5g00785 348 CDD bac_FRK 24 326 - -
Rops5g00785 348 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301
Rops5g00785 348 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Rops5g00785 348 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Rops5g00785 348 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Rops5g00785 348 PANTHER HEXOKINASE FAMILY MEMBER 24 339 - -
Rops5g00785 348 FunFam Probable fructokinase-2 22 343 - -
Rops5g00785 348 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016301
Rops5g00785 348 Gene3D - 21 347 IPR029056 -
Rops5g00785 348 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00785 Rops-Chr5 14853082 14858240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00785 K00847 - gmx:100778752 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00785 5 14853082 14858240 Rops6g02816 6 50505059 50509074 ECH
Rops5g00785 5 14853082 14858240 Rops5g00785 5 14853082 14858240 ECH
Rops5g00785 5 14853082 14858240 Rops6g02816 6 50505059 50509074 PCT