Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02791 ATGGGGGCTGGTATTTCTTCAACTGCAGAAAAAGATGGAGGGTCTAATTCTCCATCATCAAGGCCTAGTCTTGGGGATATCCCAGAAAGCTGCATCTCCTCCTTGCTTATGAATCTTGATCCACCTGATATATGCAAATTGGCAAGAGTGAACAGCGCTTTTCATCGAGCTTCCTCAGCTGATTTTGTATGGGAATCAAAGTTGCCACCAAGTTATAAGTTTCTTGCTAAAAAAGTTCTTGGTGAAGAAAATCTTGCTTCCATGACTAAGAAAGAGATTTATGCAAAATTGTGTATGCCAAATCGCTTTGATGGTGGTACCAAAGAAGTTTGGTTGGACAAATGCAGTGGACAAGTTTGTTTGTTCATGTCATCAAAGTCCTTGAAGATCACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACTGAGGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTGGGAGAGCTAGAGTTTGTATTTCCTGTGGGGAGTTACAGCATAATTTTCAGACTCCAATTGGGCAAGGCCTCCAAAAGATTGGGCCGGCGTGTGTGCAATGTTGACCAAGTGCATGGCTGGGATATCAAGCCCGTTCGGTTCCAATTCTCAACATCAGACGGTCAGCAATCACTCTCAGAGTGTTACTTGGGTGGGCCAAGGGAATGGGTTTACTACCACGTTGGAGATTTCGTAGTTGAAAAGCCCAATGAACCCATAAAAATCAAGTTTTCTTTGGCCCAAATTGATTGCACTCATACCAAAGGTGGCCTCTGCGTAGATGGTGCAATTATTTGCCCAATTGAGTTTAAAGAGAGACTTAAACACCTTTAG 864 0.4248 MGAGISSTAEKDGGSNSPSSRPSLGDIPESCISSLLMNLDPPDICKLARVNSAFHRASSADFVWESKLPPSYKFLAKKVLGEENLASMTKKEIYAKLCMPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFVFPVGSYSIIFRLQLGKASKRLGRRVCNVDQVHGWDIKPVRFQFSTSDGQQSLSECYLGGPREWVYYHVGDFVVEKPNEPIKIKFSLAQIDCTHTKGGLCVDGAIICPIEFKERLKHL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02791 287 MobiDBLite consensus disorder prediction 9 25 - -
Rops6g02791 287 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Rops6g02791 287 PANTHER F-BOX PROTEIN PP2-A15 6 284 - -
Rops6g02791 287 Pfam Phloem protein 2 119 277 IPR025886 -
Rops6g02791 287 MobiDBLite consensus disorder prediction 1 25 - -
Rops6g02791 287 SUPERFAMILY F-box domain 13 78 IPR036047 GO:0005515
Rops6g02791 287 CDD F-box_AtSKIP3-like 24 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02791 Rops-Chr6 50052968 50056178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02791 - - gmx:100782620 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00823 5 15724860 15728167 Rops6g02791 6 50052968 50056178 ECH
Rops6g02791 6 50052968 50056178 Rops6g02791 6 50052968 50056178 ECH
Rops5g00823 5 15724860 15728167 Rops6g02791 6 50052968 50056178 PCT