Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02727 ATGCCTGAAGCACCAGGGTTCCAAATGACCCAAACTTCGCCGGTGAAACTCGTGGAAACCACAATTTCAGTACAGCGTCCCCGGATTTGGGGTGAGGCCAGAAAGTTGTTGAAAGATATGGAGGAATACTTTGAGATTGATGTTGATACTGGAAGCAATATCATTGATAATGCTATCTCGCGCCTTGCATTGGGATATGTTACAAGCGTTACCATCGATATAAGGTTTGTTGTGGAGGTGCAGACGGAGGAAGAGTTGTCAGAAAAATTGATCAAAGCTGTTAGAGTTTGTGATATTGTGTGTTCTCCAAAGACAGAGCAAAGGGAGAAGAAGAATCTCCCAAGTCAAGCATGGCCATTGCTAATCACCTCACTTCCAGGCCTTGCAAAATCCTCTTGTCATTGCTCTTCTTTCACCAAAAGCATCAGCATTGGGCACAGGGTGTTCAAGATTCCTTCTTGGCTCATGAATATGCCTCTTGCAACTCGTCAGATTGGGACTTCACGTTTCCAAACTTTTGAAAAATCAAGGAAGAAGAGGCTCAGGAGAGGTTTTGAGTTTCATGAAACCACACCACTAAAATCACACCCACCTATCCTAACAACTCCACAGAACCACCACCCTCTCTCCCGAAATTACCAAAACACCATCCACGTTATGCATAATCATTGCACAATCTTACTCAGACTCCCCATATTGCCCTCTCTCTCTCACACCATCATCCATCATCATCATCCCACCAAGGCAAAGCTCAACAGCACGAGAAGGAGACACATTCCTAGTCGCTTCATCAGAAGAACCAATTGGGTTGTCCCCAAGACAATGCCTTCCTCTTCCTTCAGTTCTCGCTGTTGCATTGATAACGACACCAACATAAACAACAACAATAACAACAGTGCTTCTTTCAGAAACTTGAAGCTGAATGAGTCAACCTTCTTGGCTTCCCTCATGCCCAAGACAGAGATTGGCGTTGACCGTTTCCTCCATTCTCACCCCCACTACGATGGCCGCGGTGCTCTCATTGCTATCTTTGATTCTGGTGTAGACCCGGCTGCTGCTGGATTACAGGTTACCTCAGATGGGAAACCAAAAATTCTTGATATCCTTGATTGCACTGGTAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTTCTGGGACATCAGGGGCATCTTTGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTTACAGAAAAACTGACTTCTCGTTTAAAGAAAGAAAGGAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGTAAAGGCTGTAAAACAACTTAATGATTTTGATCAGCAACACATCAAGGTGGAGGATGCTAAGCTTAAAAAGGCTCGTGAAGATCTCCAGAATAGACTTGATCTTCTTAGAAAGCAATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGGGTTGCTCTTGACACTCACAATCTTGAGGATGATCCAGATTGTGGGAAGCTTGCTAAATTTGTACCCTTAACTAATTATAGGACTGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTGAATGTCTATGAGGATGGGAATGTCTTAAGTATTGTAACAGACAGCTCTCCTCACGGCACCCATGTTGCTGGTATAGCTACTGCATTCCACCCAGAGGAACCTTTATTGAATGGAGTTGCGCCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGATCAATGGAAACTGGAACTGCCTTGACTCGGGCACTGATAGCTGCTGTGGAGCATAAATGTGATCTTATCAACATGAGTTATGGAGAGCCAACGTTGCTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGCAGTAAACAAGCACCGCCTGATATTTGTGAGCAGTGCTGGTAATAATGGGCCAGCATTAAGCACTGTTGGTGCACCTGGTGGTACATCTTCTAGTATCATAGGTGTCGGTGCGTATGTTTCTCCTGCTATGGCAGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACTTGGTCTAGCAGAGGACCAACAGCTGATGGAGATCTTGGTGTCTGTGTAAGTGCTCCTGGTGGCGCTATCGCTCCTGTTCCCACATGGACACTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCTCCATCAGCCTGTGGGGGAATTGCCTTGCTCATAAGTGCAATGAAGGCCGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCACTTGAGAATACATCTGTTCCCATAGGTGATTCACCTGAGGATAAATTATCCACTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATACAGCAGTCTAAAAATATTCCATGTGTTTGGTATCAAATAAACATCAAGCAATCTGGAAAAACACATCCTTCATCACGGGGCATTTACCTGAGGGAGGCTAATGCTTGCCGACAATCTACTGAGTGGACGGTGCAAGTTGAACCAAATTTTCATGAAGGTGCCAGCAAGTTTGAAGAATTGGTAGTGTTTGAGGAGTGCATTGAGTTACACTCTTCAGACAGGACAGTTGTGCATGCCCCCGAGTATCTACTGCTCACTCATAATGGCCGCACCTTTAACATATTTGTCGATCCTACCAATTTATGTGATGGTCTGCATTATTATGAGGTCTTTGGTATTGACTGCAAAGCACCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCCATGGCTGTAACTAATAGACCTCCACAAGTTTCATTTTCAAAGATGTTGTTCCAGCCAGGCCACATAGAAAGGAAATATATAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACCATGAATGCATCAAGTTTTGATACAGCTCGAAGATTTTTTGTGGACACAGTTCAGATATGTCCATTGCAAAGACCTTCTAAATGGAGGAATGTGATAACTTTTTCTTCCCCTGCTGCCAAAAGCTTCACCTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTACCAGTGTGGATCTTGAGGTTGTGTTTCATGGTGTAAAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCAGTCAGAATTGATGCTGAAGCACTACTGGCATCTGAGAAACTTGCACCTGCAGCAATTCTAAATAAGATAAGGGTCCCGTATCGACCAATAGATGCCAAGATTAGTGCACTCTCAACTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTAGCACTGACATTAACATACAAGGTCAAATTGGAAGCTGGAGCTGAAATAAAACCTCGAATACCATTTTTAAATGGCCGGATATATGATACTAAATTTGAGTCTCAATTTTATATGATTTCCGATTCAAATAAGCAAGTCTATTCAAGTGGAGATGTCTATCCGAACTCTACAAAACTTCCCAAGGGAGAATACAATTTACAGCTATATGTGAGGCATGAAAACTTGCAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGACATCATTTGGTTATGCTTTTTCTCTCAACCAGATGGTCCACTGATGGGAAATGGTTCCTTTAAGTCCTCAACATTAATTCCTGGTATAAAAGAAGGATTTTATCTTGGTCCACCACCAAAAGACAAGCTTCCCAAGAACTCTCCACAAGGATCTGTATTGGTGGGATCAATATCATATGGGAAATTATCATTTGCCGGCCAGGGGGAGCATAAAAATCCAGAAAAGCACCCTGTATCATATCGTGTTTCTTATATAGTTCCCCCAAATAAGATTGATGAAGACAAGGGAAAAAATTCTTCCTTATCTTCCAAGAAGACAGTTTCTGAACGTTTAGAAGAAGAGGTACGAGATGCAAAAATAAAAGTGCTTGGAGGCCTAAAACAAGAAAGCGATGAAGAGTGCTTGGAATGGAACAAGTTGTCTGCCTCACTCAAATCTGAATATCCAAAGTACACTCCGTTGCTTGCAAAGATTTTGGATGGTTTAGTTTCCAGGAGTAACATCAAAGACAAATTCCATCATGATGAAGAGGTAATTAATGCAGCAAATGAGGTGATTGACAGTATTGATAGAGAAGAGTTAGCAAAATCTTTTGCAATAAAAAATGATCCAGAAGATGACGAAGCGGAGAAAATCAAGAAAAAGATGGAATCAAAGCGGGACCAGTTAGCAGAGGCACTTTACCAAAAGGGGCTTGCACTGGCAGAAATTGAGTCTTTAAAGGTAGATAATTCTCTGGCTTCGGCTGCATCAGAAGGTGCAGAACAAGATGTGGAGAAATCCAAGGATGATGGCATTCATCCAGATTTGTTTGAAGAGAACTTTAATGAACTGAAGAAATGGGTTGATGTTAAGTGCACAAAATATGGAATCCTCTTGGTGACAAATGAGAGGCGTAGTCAAAGGCTTGGGACTGCATTGAAGGTACTGAATGACATGATCCAAGAAGACTCAGAGCCTGCCAAGAAGAAACTGTATGAACTAAGGGTGTCTTTGCTTGAGGAAATCGGATGGACTCATTTGGCAACATATGAGAGACAGTGGATGCTTGTGCGTTTTCCTCCTACCTTGCCCCTTTTCTAG 4794 0.4276 MPEAPGFQMTQTSPVKLVETTISVQRPRIWGEARKLLKDMEEYFEIDVDTGSNIIDNAISRLALGYVTSVTIDIRFVVEVQTEEELSEKLIKAVRVCDIVCSPKTEQREKKNLPSQAWPLLITSLPGLAKSSCHCSSFTKSISIGHRVFKIPSWLMNMPLATRQIGTSRFQTFEKSRKKRLRRGFEFHETTPLKSHPPILTTPQNHHPLSRNYQNTIHVMHNHCTILLRLPILPSLSHTIIHHHHPTKAKLNSTRRRHIPSRFIRRTNWVVPKTMPSSSFSSRCCIDNDTNINNNNNNSASFRNLKLNESTFLASLMPKTEIGVDRFLHSHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADADGCISGTSGASLVINTSWKNPSGEWHVGYKLVYELFTEKLTSRLKKERKKKWDEKNQEEIVKAVKQLNDFDQQHIKVEDAKLKKAREDLQNRLDLLRKQSESYDDKGPVIDAVVWYDGEVWRVALDTHNLEDDPDCGKLAKFVPLTNYRTERKYGVFSKLDACTFVVNVYEDGNVLSIVTDSSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTALTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEAVNKHRLIFVSSAGNNGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCVSAPGGAIAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYSVRKALENTSVPIGDSPEDKLSTGQGLMQVDKCYEYIQQSKNIPCVWYQINIKQSGKTHPSSRGIYLREANACRQSTEWTVQVEPNFHEGASKFEELVVFEECIELHSSDRTVVHAPEYLLLTHNGRTFNIFVDPTNLCDGLHYYEVFGIDCKAPWRGPLFRIPITITKPMAVTNRPPQVSFSKMLFQPGHIERKYIEVPHGASWVEATMNASSFDTARRFFVDTVQICPLQRPSKWRNVITFSSPAAKSFTFRVVGGQTLELVIAQFWSSGIGSHETTSVDLEVVFHGVKVNQEEIVLDGSEAPVRIDAEALLASEKLAPAAILNKIRVPYRPIDAKISALSTDRDKLPSGKQILALTLTYKVKLEAGAEIKPRIPFLNGRIYDTKFESQFYMISDSNKQVYSSGDVYPNSTKLPKGEYNLQLYVRHENLQILEKMKQLVLFIERNLEEKDIIWLCFFSQPDGPLMGNGSFKSSTLIPGIKEGFYLGPPPKDKLPKNSPQGSVLVGSISYGKLSFAGQGEHKNPEKHPVSYRVSYIVPPNKIDEDKGKNSSLSSKKTVSERLEEEVRDAKIKVLGGLKQESDEECLEWNKLSASLKSEYPKYTPLLAKILDGLVSRSNIKDKFHHDEEVINAANEVIDSIDREELAKSFAIKNDPEDDEAEKIKKKMESKRDQLAEALYQKGLALAEIESLKVDNSLASAASEGAEQDVEKSKDDGIHPDLFEENFNELKKWVDVKCTKYGILLVTNERRSQRLGTALKVLNDMIQEDSEPAKKKLYELRVSLLEEIGWTHLATYERQWMLVRFPPTLPLF* 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02727 1597 Pfam Subtilase family 336 798 IPR000209 GO:0006508|GO:0008236
Rops6g02727 1597 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 40 99 IPR009769 -
Rops6g02727 1597 Gene3D - 380 448 - -
Rops6g02727 1597 Pfam Tripeptidyl peptidase II 1099 1283 IPR022229 -
Rops6g02727 1597 Coils Coil 466 493 - -
Rops6g02727 1597 Gene3D - 1342 1597 IPR046939 -
Rops6g02727 1597 PRINTS Subtilisin serine protease family (S8) signature 568 581 IPR015500 -
Rops6g02727 1597 PRINTS Subtilisin serine protease family (S8) signature 755 771 IPR015500 -
Rops6g02727 1597 PRINTS Subtilisin serine protease family (S8) signature 336 355 IPR015500 -
Rops6g02727 1597 Gene3D Peptidase S8/S53 domain 495 830 IPR036852 GO:0004252|GO:0006508
Rops6g02727 1597 SUPERFAMILY Subtilisin-like 300 829 IPR036852 GO:0004252|GO:0006508
Rops6g02727 1597 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 316 798 IPR034051 GO:0006508|GO:0008240
Rops6g02727 1597 ProSitePatterns Serine proteases, subtilase family, serine active site. 756 766 IPR023828 -
Rops6g02727 1597 FunFam Tripeptidyl-peptidase 2 homolog 496 829 - -
Rops6g02727 1597 Gene3D - 832 966 IPR046940 -
Rops6g02727 1597 FunFam Tripeptidyl-peptidase 2 832 963 - -
Rops6g02727 1597 ProSitePatterns Serine proteases, subtilase family, histidine active site. 572 582 IPR022398 -
Rops6g02727 1597 FunFam Tripeptidyl-peptidase 2 380 441 - -
Rops6g02727 1597 Coils Coil 1338 1358 - -
Rops6g02727 1597 ProSiteProfiles Serine proteases, subtilase domain profile. 321 819 - -
Rops6g02727 1597 FunFam tripeptidyl-peptidase 2 isoform X1 319 404 - -
Rops6g02727 1597 PANTHER PEPTIDASE S8 313 1217 - -
Rops6g02727 1597 Coils Coil 1443 1466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02727 Rops-Chr6 48987932 49013593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02727 K01280 - gmx:100787184 2386.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02727 6 48987932 49013593 Rops6g02727 6 48987932 49013593 ECH
Rops5g00895 5 17350631 17394102 Rops6g02727 6 48987932 49013593 PCT